RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CLINT1Q14677 625 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 CD300EQ496F6 205 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-206ENST00000531480 SMIM3Q9BZL3 60 aa10.91□□□□□ -0.66
CPSF1-206ENST00000531480 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-206ENST00000531480 ZNF256Q9Y2P7 627 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-206ENST00000531480 TRAV25A0A0B4J276 109 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 IZUMO1RA6ND01 250 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 CHEK1O14757 476 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 S100A7P31151 101 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 RAB2AP61019 212 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 SERF2P84101 59 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 NDUFA5Q16718 116 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 LCN12Q6JVE5 192 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 S100A7AQ86SG5 101 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 ZNF680Q8NEM1 530 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 OR51G1Q8NGK1 321 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 SLC25A32Q9H2D1 315 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
CPSF1-206ENST00000531480 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 RGS13O14921 159 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 ZNF207O43670 478 aaKnown RBP10.89□□□□□ -0.67
CPSF1-206ENST00000531480 CFDP00746 253 aaPredicted RBP10.89□□□□□ -0.67
CPSF1-206ENST00000531480 PRB2P02812 416 aaPredicted RBP10.89□□□□□ -0.67
CPSF1-206ENST00000531480 GP9P14770 177 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 AKR1C1Q04828 323 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 USF2Q15853 346 aaPredicted RBP10.89□□□□□ -0.67
CPSF1-206ENST00000531480 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 TEPPQ6URK8 271 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 BTNL8Q6UX41 500 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 DYNLRB2Q8TF09 96 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 RNF125Q96EQ8 232 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
CPSF1-206ENST00000531480 SMCO3A2RU48 225 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 TSPAN4O14817 238 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 APOHP02749 345 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-206ENST00000531480 IL4P05112 153 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 NPPCP23582 126 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 PLP1P60201 277 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 SELENOTP62341 195 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 BLOC1S1P78537 153 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 RPL7L1Q6DKI1 246 aaKnown RBP10.88□□□□□ -0.67
CPSF1-206ENST00000531480 DPPA3Q6W0C5 159 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-206ENST00000531480 METTL26Q96S19 204 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 PSMG3Q9BT73 122 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-206ENST00000531480 SLC45A2Q9UMX9 530 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 WDR83OSQ9Y284 106 aa10.88□□□□□ -0.67
CPSF1-206ENST00000531480 TGP01266 2768 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 K7EIL1 84 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 CD5P06127 495 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 AKR1C8PQ5T2L2 129 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 CYP2G1PQ6ZSU1 146 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 RNF2Q99496 336 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 WDR61Q9GZS3 305 aaKnown RBP10.87□□□□□ -0.67
CPSF1-206ENST00000531480 ARV1Q9H2C2 271 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 CYTL1Q9NRR1 136 aa10.87□□□□□ -0.67
CPSF1-206ENST00000531480 A0A1W2PS18 150 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 FGF7P21781 194 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 BMI1P35226 326 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 Q8N1Y9 231 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 BPIFCQ8NFQ6 507 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 OR2G3Q8NGZ4 309 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 SAT2Q96F10 170 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-206ENST00000531480 PRR25Q96S07 402 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 MGST2Q99735 147 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 SPAG8Q99932 426 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-206ENST00000531480 RNF24Q9Y225 148 aa10.86□□□□□ -0.67
CPSF1-206ENST00000531480 UBE2L5PA0A1B0GUS4 154 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 AGPAT2O15120 278 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 BUB3O43684 328 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 SPP1P10451 314 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 Q6ZRG5 221 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 HSD17B11Q8NBQ5 300 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 GLMPQ8WWB7 406 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 TMEM231Q9H6L2 316 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 RABAC1Q9UI14 185 aa10.85□□□□□ -0.67
CPSF1-206ENST00000531480 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-206ENST00000531480 PRR20EP86478 221 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 PRR20CP86479 221 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 PRR20DP86480 221 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 PRR20BP86481 221 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 PRR20AP86496 221 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 ACOT6Q3I5F7 207 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-206ENST00000531480 C1orf194Q5T5A4 169 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 PXDC1Q5TGL8 231 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 GGTLC1Q9BX51 225 aa10.84□□□□□ -0.67
CPSF1-206ENST00000531480 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 A8MZ25 164 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 LINC00869P0C866 280 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 ATP6V0CP27449 155 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 CAMLGP49069 296 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 LYZP61626 148 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms