RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 ACACAQ13085 2346 aa15.39■□□□□ 0.05
VPS28-213ENST00000530983 SHISA9B4DS77 424 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 TOMM40O96008 361 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 FAM87AP0C7U9 286 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 UBE2V1Q13404 147 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 ATP5L2Q7Z4Y8 100 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 PRB3Q04118 309 aaPredicted RBP15.38■□□□□ 0.05
VPS28-213ENST00000530983 ARL6IP6Q8N6S5 226 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 C22orf15Q8WYQ4 148 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 MRPS16Q9Y3D3 137 aaKnown RBP15.38■□□□□ 0.05
VPS28-213ENST00000530983 COX11Q9Y6N1 276 aa15.38■□□□□ 0.05
VPS28-213ENST00000530983 PIEZO2Q9H5I5 2752 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 E7EQL1 145 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 CA7P43166 264 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 SSX8Q7RTT4 187 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 TCF24Q7RTU0 167 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 ABHD17AQ96GS6 310 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 GSX1Q9H4S2 264 aaPredicted RBP15.37■□□□□ 0.05
VPS28-213ENST00000530983 SIGLEC9Q9Y336 463 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 H3BTX0 84 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 C5orf17Q8NAS9 161 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 PRSS22Q9GZN4 317 aa15.37■□□□□ 0.05
VPS28-213ENST00000530983 RPP21Q9H633 154 aaKnown RBP15.37■□□□□ 0.05
VPS28-213ENST00000530983 IGHV2-26A0A0B4J1V2 119 aa15.36■□□□□ 0.05
VPS28-213ENST00000530983 VSTM5A8MXK1 200 aa15.36■□□□□ 0.05
VPS28-213ENST00000530983 HSBP1O75506 76 aa15.36■□□□□ 0.05
VPS28-213ENST00000530983 LTAP01374 205 aa15.36■□□□□ 0.05
VPS28-213ENST00000530983 IGLV1-47P01700 117 aa15.36■□□□□ 0.05
VPS28-213ENST00000530983 PRR31Q5SQ13 230 aa15.36■□□□□ 0.05
VPS28-213ENST00000530983 Q8NA96 180 aa15.36■□□□□ 0.05
VPS28-213ENST00000530983 IGHV1-69-2A0A0G2JMI3 117 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 PLP1P60201 277 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 C8orf46Q8TAG6 207 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 FMC1Q96HJ9 113 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 Q9H3A6 140 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 GVINP1Q7Z2Y8 2422 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 RIF1Q5UIP0 2472 aaKnown RBP15.35■□□□□ 0.05
VPS28-213ENST00000530983 LOC105371242A0A075B767 164 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 C19orf71A6NCJ1 209 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 FAM181BA6NEQ2 426 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 TEX22C9J3V5 150 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 K7EP13 123 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 TCRAP04437 139 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 GFRALQ6UXV0 394 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 ZNF738Q8NE65 137 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 OR2D3Q8NGH3 330 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 GTSF1Q8WW33 167 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 TNFRSF14Q92956 283 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 ABCA1O95477 2261 aa15.35■□□□□ 0.05
VPS28-213ENST00000530983 PAX2Q02962 417 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 EBLN2Q6P2I7 272 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 F11RQ9Y624 299 aaKnown RBP15.34■□□□□ 0.05
VPS28-213ENST00000530983 APC2O95996 2303 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 POLEQ07864 2286 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 IGHV1-3A0A0C4DH29 117 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 M0R2Z0 102 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 HBBP68871 147 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 RNASEKQ6P5S7 137 aaKnown RBP15.34■□□□□ 0.05
VPS28-213ENST00000530983 URB1-AS1Q96HZ7 61 aa15.34■□□□□ 0.05
VPS28-213ENST00000530983 PMCHL1Q16048 86 aa15.33■□□□□ 0.05
VPS28-213ENST00000530983 CT83Q5H943 113 aa15.33■□□□□ 0.05
VPS28-213ENST00000530983 PPP1R27Q86WC6 154 aa15.33■□□□□ 0.05
VPS28-213ENST00000530983 ZNF492Q9P255 531 aa15.33■□□□□ 0.05
VPS28-213ENST00000530983 INSIG2Q9Y5U4 225 aa15.33■□□□□ 0.05
VPS28-213ENST00000530983 TACC2O95359 2948 aa15.33■□□□□ 0.04
VPS28-213ENST00000530983 SAPCD1Q5SSQ6 148 aa15.33■□□□□ 0.04
VPS28-213ENST00000530983 OR4F17Q8NGA8 305 aa15.33■□□□□ 0.04
VPS28-213ENST00000530983 ZNF835Q9Y2P0 537 aa15.33■□□□□ 0.04
VPS28-213ENST00000530983 A8MWL6 223 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 BUB1B-PAK6H3BSN5 160 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 P01737 135 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 CDKN1BP46527 198 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 OR8B3Q8NGG8 313 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 OR8B2Q96RD0 313 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 RALYQ9UKM9 306 aaKnown RBP15.32■□□□□ 0.04
VPS28-213ENST00000530983 HIGD1AQ9Y241 93 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 TRAV9-2A0A087WT02 112 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 C2orf70A6NJV1 201 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 IGLC1P0CG04 106 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 PSG1P11464 419 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 Q56UQ5 140 aa15.32■□□□□ 0.04
VPS28-213ENST00000530983 IGLL1P15814 213 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 LYNX1G3V0Z9 82 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 LYNX1P0DP58 116 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 CD24P25063 80 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 NBL1P41271 181 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 LYZP61626 148 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 FBLN7Q53RD9 439 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 PGLYRP4Q96LB8 373 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 FBXL15Q9H469 300 aa15.31■□□□□ 0.04
VPS28-213ENST00000530983 TRAV8-1A0A0A6YYK1 113 aa15.3■□□□□ 0.04
VPS28-213ENST00000530983 IGHV2-70DA0A0C4DH43 119 aa15.3■□□□□ 0.04
VPS28-213ENST00000530983 Q86TA4 180 aa15.3■□□□□ 0.04
VPS28-213ENST00000530983 KIR3DL3Q8N743 410 aa15.3■□□□□ 0.04
VPS28-213ENST00000530983 NGBQ9NPG2 151 aa15.3■□□□□ 0.04
VPS28-213ENST00000530983 ZFHX2Q9C0A1 2572 aaPredicted RBP15.3■□□□□ 0.04
VPS28-213ENST00000530983 I3L2K1 104 aa15.29■□□□□ 0.04
VPS28-213ENST00000530983 APOBEC3AP31941 199 aaPredicted RBP15.29■□□□□ 0.04
VPS28-213ENST00000530983 FOXA3P55318 350 aaPredicted RBP15.29■□□□□ 0.04
VPS28-213ENST00000530983 PRR30Q53SZ7 412 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms