RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 SPSB3Q6PJ21 355 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 SLC25A48Q6ZT89 311 aaKnown RBP6.29□□□□□ -1.4
CTNND1-223ENST00000529986 Q8TAT8 98 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 TMEM158Q8WZ71 300 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 RPRMLQ8N4K4 120 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 GREB1Q4ZG55 1949 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 A0A0G2JRQ6 117 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 TMEM8BA6NDV4 472 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 IQCF6A8MYZ5 107 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 SLC25A20O43772 301 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 PAX1P15863 534 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 NTF4P34130 210 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 CDPF1Q6NVV7 123 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 SRSF8Q9BRL6 282 aaKnown RBP6.29□□□□□ -1.4
CTNND1-223ENST00000529986 LINC00312Q9Y6C7 94 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 SDK2Q58EX2 2172 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 J3QW42 95 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 SMAD7O15105 426 aaKnown RBP6.29□□□□□ -1.4
CTNND1-223ENST00000529986 SELLP14151 372 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 Q6ZVH6 145 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 AMN1Q8IY45 258 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 C8orf46Q8TAG6 207 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 KLHDC3Q9BQ90 382 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 SMPXQ9UHP9 88 aa6.29□□□□□ -1.4
CTNND1-223ENST00000529986 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 MALP21145 153 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 FOXF2Q12947 444 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 PVRIGQ6DKI7 326 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 C20orf144Q9BQM9 153 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 LINC00527Q9UJ94 153 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 RPUSD1Q9UJJ7 312 aaKnown RBP6.28□□□□□ -1.4
CTNND1-223ENST00000529986 MTCL1Q9Y4B5 1905 aaKnown RBP6.28□□□□□ -1.4
CTNND1-223ENST00000529986 NBR2O15453 112 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 C9orf153Q5TBE3 101 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 GAGE2AQ6NT46 116 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 FDCSPQ8NFU4 85 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 A0A1B0GWJ7 208 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 LYNX1G3V0Z9 82 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 LYNX1P0DP58 116 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 FOXG1P55316 489 aaPredicted RBP6.28□□□□□ -1.4
CTNND1-223ENST00000529986 BSPH1Q075Z2 132 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 MLANAQ16655 118 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 TMEM14EPQ6UXP3 125 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 Q6ZWC4 215 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 MRPL27Q9P0M9 148 aaKnown RBP6.28□□□□□ -1.4
CTNND1-223ENST00000529986 FREM3P0C091 2139 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 A0A1W2PR77 199 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 GAGE1Q13065 139 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 DOPEY2Q9Y3R5 2298 aa6.28□□□□□ -1.4
CTNND1-223ENST00000529986 PLXNA3P51805 1871 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 TRAV40A0A0B4J280 105 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 F2Z2F3 143 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 SLC50A1Q9BRV3 221 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 SBF1O95248 1867 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 B9A039 149 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 MLNRO43193 412 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 SH2D1AO60880 128 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 RHOGP84095 191 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 Q6ZRM9 215 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 PIMREGQ9BSJ6 248 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-223ENST00000529986 A0A1W2PRX2 142 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 IGLC2P0DOY2 106 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 IGLC3P0DOY3 106 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 ATP5J2P56134 94 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 KLF12Q9Y4X4 402 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 WDR81Q562E7 1941 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 APOBEC3AP31941 199 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-223ENST00000529986 ASPHD1Q5U4P2 390 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 SLX1AQ9BQ83 275 aa6.27□□□□□ -1.41
CTNND1-223ENST00000529986 SLC25A39Q9BZJ4 359 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-223ENST00000529986 K7EP13 123 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 PSPNO60542 156 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 IGLV3-19P01714 112 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 PFN1P07737 140 aaKnown RBP6.26□□□□□ -1.41
CTNND1-223ENST00000529986 LGALS1P09382 135 aaKnown RBP6.26□□□□□ -1.41
CTNND1-223ENST00000529986 ZNF876PQ49A33 203 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 RASL11AQ6T310 242 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 HAPLN4Q86UW8 402 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 MED12Q93074 2177 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 DOCK10Q96BY6 2186 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 PAX4O43316 350 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 PHLDA1Q8WV24 401 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-223ENST00000529986 MBNL3Q9NUK0 354 aaKnown RBP6.26□□□□□ -1.41
CTNND1-223ENST00000529986 EFNA2O43921 213 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 IGHV2-5P01817 119 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 FAM166AQ6J272 317 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 C14orf178Q8N769 122 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-223ENST00000529986 CYYR1Q96J86 154 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 LINC00473A8K010 186 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 TOMM40O96008 361 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 METRNQ9UJH8 293 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 TIMM23O14925 209 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 LYL1P12980 280 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 S100A7L2Q5SY68 101 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 C9orf106Q8NAJ2 232 aa6.26□□□□□ -1.41
CTNND1-223ENST00000529986 DOCK9Q9BZ29 2069 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms