RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 AK6Q9Y3D8 172 aaKnown RBP3.19□□□□□ -1.9
CSDE1-212ENST00000529046 STARD9Q9P2P6 4700 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 HYDINQ4G0P3 5121 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 TRBV7-1A0A0A6YYK4 115 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 C2orf70A6NJV1 201 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 BET1O15155 118 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 DHFRP00374 187 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 CA1P00915 261 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 TRBV12-3P01733 135 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 C8orf88P0DMB2 117 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 HIST1H1BP16401 226 aaKnown RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 CD36P16671 472 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 FGF9P31371 208 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 FABP5Q01469 135 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 ZNF45Q02386 682 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 ATP5G2Q06055 141 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 SLAQ13239 276 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 EIF4EBP1Q13541 118 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 ARFRP1Q13795 201 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 TIGITQ495A1 244 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 CNIH2Q6PI25 160 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 PUSL1Q8N0Z8 303 aaKnown RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 C14orf178Q8N769 122 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 OR4A5Q8NH83 315 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 TMEM167AQ8TBQ9 72 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 MARCH1Q8TCQ1 289 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 MARC2Q969Z3 335 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 PHYHIPLQ96FC7 376 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 MGLLQ99685 303 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 HSD17B10Q99714 261 aaKnown RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 SLC2A9Q9NRM0 540 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 COA4Q9NYJ1 87 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 TP53TG1Q9Y2A0 90 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 RBMX2Q9Y388 322 aaKnown RBP3.18□□□□□ -1.9
CSDE1-212ENST00000529046 SACSQ9NZJ4 4579 aa3.18□□□□□ -1.9
CSDE1-212ENST00000529046 A0A0A6YYH2 397 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 KIR2DL5BA0A0G2JN68 375 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 KIR2DL5BA0A0G2JPC4 375 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 LOC100131303A0A0U1RQF7 123 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 TRDV1A0A1B0GX56 115 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RBMY1BA6NDE4 496 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RBMY1EA6NEQ0 496 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 A6NJ64 397 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 OR11H12B2RN74 326 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RBFOX2O43251 390 aaKnown RBP eCLIP3.17□□□□□ -1.93e-6■■■■□ 22.3
CSDE1-212ENST00000529046 OR2J3O76001 311 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 CRYZL1O95825 349 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 HRASP01112 189 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 CD7P09564 240 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RBMY1DP0C7P1 496 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 SAA1P0DJI8 122 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 CTRB1P17538 263 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RAB3BP20337 219 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 CBLN1P23435 193 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 TALDO1P37837 337 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RPS25P62851 125 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RHOGP84095 191 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 COTL1Q14019 142 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 TNXAQ16473 311 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 MRPL23Q16540 153 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 POU2AF1Q16633 256 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 CDNFQ49AH0 187 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 HACD4Q5VWC8 232 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 CTRB2Q6GPI1 263 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 THOC7Q6I9Y2 204 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 SLC16A13Q7RTY0 426 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 HSD17B13Q7Z5P4 300 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 KIR2DL5AQ8N109 375 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 C15orf54Q8N8G6 183 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 OR4S2Q8NH73 311 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 KIR2DL5BQ8NHK3 375 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 LRRC20Q8TCA0 184 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 CD300LFQ8TDQ1 290 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 TMEM203Q969S6 136 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 OR2A7Q96R45 310 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 PHB2Q99623 299 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 GINS4Q9BRT9 223 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 ZNF430Q9H8G1 570 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 NDUFB11Q9NX14 153 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 BET1LQ9NYM9 111 aa3.17□□□□□ -1.9
CSDE1-212ENST00000529046 MRPL27Q9P0M9 148 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 RBM7Q9Y580 266 aaKnown RBP3.17□□□□□ -1.9
CSDE1-212ENST00000529046 IGLV11-55A0A075B6I3 123 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 IGKV1D-8A0A087WSZ0 117 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 IZUMO1RA6ND01 250 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 K7EMT4 169 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 CYB5BO43169 146 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 ELK1P19419 428 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 MYL9P24844 172 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 RPL27AP46776 148 aaKnown RBP3.16□□□□□ -1.9
CSDE1-212ENST00000529046 RPL29P47914 159 aaKnown RBP3.16□□□□□ -1.9
CSDE1-212ENST00000529046 HSPA13P48723 471 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 CLDN12P56749 244 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 TAS2R31P59538 309 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 TNFRSF9Q07011 255 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 UBE2UQ5VVX9 321 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 ZFAND6Q6FIF0 208 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 IDO2Q6ZQW0 420 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms