RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 LOC102724200A0A096LPH7 203 aaPredicted RBP3.71□□□□□ -1.82
PCF11-202ENST00000528336 DUXBA0A1W2PPF3 345 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 A8MUN3 132 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 H0YGG7 62 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 SOCS1O15524 211 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 GSTZ1O43708 216 aaPredicted RBP3.71□□□□□ -1.82
PCF11-202ENST00000528336 TRAF3IP2O43734 574 aaPredicted RBP3.71□□□□□ -1.82
PCF11-202ENST00000528336 OR7C2O60412 319 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 IGHV3-11P01762 117 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 ZNF25P17030 456 aaPredicted RBP3.71□□□□□ -1.82
PCF11-202ENST00000528336 EVI2AP22794 236 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 OPRM1P35372 400 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 CA7P43166 264 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 GABARAPL2P60520 117 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 RPS11P62280 158 aaKnown RBP eCLIP3.71□□□□□ -1.82
PCF11-202ENST00000528336 DHRS2Q13268 280 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 TMEM183BQ1AE95 376 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 DEFB110Q30KQ9 67 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 RNASE10Q5GAN6 216 aaKnown RBP3.71□□□□□ -1.82
PCF11-202ENST00000528336 ZNF678Q5SXM1 525 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 Q6ZS49 121 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 TMEM183AQ8IXX5 376 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 C1orf174Q8IYL3 243 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 Q8N9L7 120 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 TMEM229BQ8NBD8 167 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 SUMF2Q8NBJ7 301 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 OR5H2Q8NGV7 314 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 SGMS2Q8NHU3 365 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 CAMK2N2Q96S95 79 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 TVP23BQ9NYZ1 205 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 NUFIP1Q9UHK0 495 aaKnown RBP3.71□□□□□ -1.82
PCF11-202ENST00000528336 PCTPQ9UKL6 214 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 ERG28Q9UKR5 140 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 CYSLTR1Q9Y271 337 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 AMMECR1Q9Y4X0 333 aaPredicted RBP3.71□□□□□ -1.82
PCF11-202ENST00000528336 FRYQ5TBA9 3013 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 SCN2AQ99250 2005 aa3.71□□□□□ -1.82
PCF11-202ENST00000528336 ANKRD11Q6UB99 2663 aaPredicted RBP3.7□□□□□ -1.82
PCF11-202ENST00000528336 ACACAQ13085 2346 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 IGLV1-50A0A075B6I6 118 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 LOC102725191A0A1B0GVB3 256 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 A0A1B0GX78 115 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 B4DEV8 164 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 H3BQF6 201 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 K7ERU9 68 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 CDS2O95674 445 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 PRB2P02812 416 aaPredicted RBP3.7□□□□□ -1.82
PCF11-202ENST00000528336 TSPAN19P0C672 248 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 METTL15P1P0C7V9 234 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 ZNF32P17041 273 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 DAPP51397 102 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 ZNF83P51522 516 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 SELENOWP63302 87 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 HOXC5Q00444 222 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 MMDQ15546 238 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 MPV17L2Q567V2 206 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 OR4K5Q8NGD3 323 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 OR8A1Q8NGG7 326 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 SLC25A40Q8TBP6 338 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 C15orf40Q8WUR7 153 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 CARD19Q96LW7 228 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 TM2D3Q9BRN9 247 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 RTL8AQ9BWD3 113 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 OR2H1Q9GZK4 316 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 IFI27L2Q9H2X8 130 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 RNF122Q9H9V4 155 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 CXorf21Q9HAI6 301 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 TMEM38BQ9NVV0 291 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 RPUSD1Q9UJJ7 312 aaKnown RBP3.7□□□□□ -1.82
PCF11-202ENST00000528336 MED31Q9Y3C7 131 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 PTPRBP23467 1997 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 NACAE9PAV3 2078 aa3.7□□□□□ -1.82
PCF11-202ENST00000528336 EPG5Q9HCE0 2579 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 ASPMQ8IZT6 3477 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 IGHV3-66A0A0C4DH42 116 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 C9JAW5 83 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 UBFD1O14562 309 aaKnown RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 RGS5O15539 181 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 IL1RNP18510 177 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 OPRK1P41145 380 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 LPAR6P43657 344 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 RPS10P46783 165 aaKnown RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 GABRA2P47869 451 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 DCDP81605 110 aaKnown RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 TMEM241Q24JQ0 296 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 Q6P435 159 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 MORN3Q6PF18 240 aaPredicted RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 RPS27LQ71UM5 84 aaKnown RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 ZDHHC22Q8N966 263 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 OR51T1Q8NGJ9 327 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 OR10D4PQ8NGN7 298 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 MRPL30Q8TCC3 161 aaKnown RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 NARS2Q96I59 477 aaKnown RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 OR2M2Q96R28 347 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 NDFIP1Q9BT67 221 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 IMUPQ9GZP8 106 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 LHX9Q9NQ69 397 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 HIGD1AQ9Y241 93 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 LAMTOR2Q9Y2Q5 125 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms