RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ZZEF1O43149 2961 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 SPINK4O60575 86 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 S100A7AQ86SG5 101 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 FAM168AQ92567 244 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 CT83Q5H943 113 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 LEMD1Q68G75 181 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
USH1C-207ENST00000527720 Q8N6K4 173 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 SHANK2-AS3Q9BTD1 123 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 PRORYQ9H606 182 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 CA1P00915 261 aaPredicted RBP12.13□□□□□ -0.47
USH1C-207ENST00000527720 SNRPCP09234 159 aaKnown RBP12.13□□□□□ -0.47
USH1C-207ENST00000527720 HOXB4P17483 251 aaPredicted RBP12.13□□□□□ -0.47
USH1C-207ENST00000527720 SLC35B1P78383 322 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 ATP5L2Q7Z4Y8 100 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 ZNF664Q8N3J9 261 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 PRO1933Q9H354 126 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
USH1C-207ENST00000527720 ABCA1O95477 2261 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 H3BRN7 92 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 BPIFA4PQ86YQ2 179 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 TTC9CQ8N5M4 171 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 NUP35Q8NFH5 326 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 ARPC1AQ92747 370 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 GNB4Q9HAV0 340 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 ZNF586Q9NXT0 402 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 ATRXP46100 2492 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 IGLV11-55A0A075B6I3 123 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 TRBV6-1A0A0K0K1D8 114 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 A0A1W2PPR1 153 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 BRS3P32247 399 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 PRR27Q6MZM9 219 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 LYPD1Q8N2G4 141 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 ZNF491Q8N8L2 437 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 PRSS22Q9GZN4 317 aa12.12□□□□□ -0.47
USH1C-207ENST00000527720 TBL2Q9Y4P3 447 aaKnown RBP12.12□□□□□ -0.47
USH1C-207ENST00000527720 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 COL6A6A6NMZ7 2263 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 WI2-2373I1.2A0A1W2PRP0 233 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 BMPR1BO00238 502 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 SCGB1D1O95968 90 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 APCSP02743 223 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 ZFP36P26651 326 aaKnown RBP12.11□□□□□ -0.47
USH1C-207ENST00000527720 CDKN1AP38936 164 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 EFNA4P52798 201 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 LY6DQ14210 128 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 REC114Q7Z4M0 266 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 RNF125Q96EQ8 232 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 FAM103A1Q9BTL3 118 aaKnown RBP12.11□□□□□ -0.47
USH1C-207ENST00000527720 NAGKQ9UJ70 344 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 RPH3ALQ9UNE2 315 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 A8MWP6 167 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 CD24P25063 80 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 MFAP4P55083 255 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 OR4F17Q8NGA8 305 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 C14orf144Q96I85 54 aa12.11□□□□□ -0.47
USH1C-207ENST00000527720 RPP21Q9H633 154 aaKnown RBP12.11□□□□□ -0.47
USH1C-207ENST00000527720 A0A1W2PRD5 423 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 A0A1W2PRF3 423 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 A0A1W2PRM7 423 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 C19orf71A6NCJ1 209 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 A8MWL6 223 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 GNG7O60262 68 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 DYNAPQ8N1N2 210 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 NEU1Q99519 415 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 THYN1Q9P016 225 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
USH1C-207ENST00000527720 TACC2O95359 2948 aa12.1□□□□□ -0.47
USH1C-207ENST00000527720 TRBV19A0A075B6N1 114 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 SAMD10Q9BYL1 202 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 GFRA4Q9GZZ7 299 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 RELNP78509 3460 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 IGHV2-70DA0A0C4DH43 119 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
USH1C-207ENST00000527720 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 SRIP30626 198 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 Q86TA4 180 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 ITLN2Q8WWU7 325 aaPredicted RBP12.09□□□□□ -0.47
USH1C-207ENST00000527720 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 C1RLQ9NZP8 487 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
USH1C-207ENST00000527720 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 F2Z2F3 143 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 H3BTX0 84 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 ZNF253O75346 499 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 P01737 135 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 IL4P05112 153 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 TMEM11P17152 192 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 KIAA1644Q3SXP7 199 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 FBLN7Q53RD9 439 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 Q6ZWC4 215 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 KCNS1Q96KK3 526 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 SGK494Q96LW2 274 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 SPTBN1Q01082 2364 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms