RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 COX11Q9Y6N1 276 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 FASNP49327 2511 aaKnown RBP10.09□□□□□ -0.79
CAPN1-208ENST00000527323 PSMB11A5LHX3 300 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 UBE2V1Q13404 147 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 KLF5Q13887 457 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-208ENST00000527323 ZNF596Q8TC21 504 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 EPDR1Q9UM22 224 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 TCRBV4S1A1TA0A5B7 111 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 H3BTX0 84 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 TNFSF4P23510 183 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 ZNF137PP52743 207 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 VAMP3Q15836 100 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 DAZAP1Q96EP5 407 aaKnown RBP10.08□□□□□ -0.8
CAPN1-208ENST00000527323 PGLYRP4Q96LB8 373 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 OR4C46A6NHA9 309 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 CCL3L1P16619 93 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 WT1-ASQ06250 92 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 ERASQ7Z444 233 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 OR10X1Q8NGY0 326 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 FAM57AQ8TBR7 257 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 FAM222BQ8WU58 562 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 FXYD5Q96DB9 178 aa10.08□□□□□ -0.8
CAPN1-208ENST00000527323 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 VWC2LB2RUY7 222 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 H0Y8G0 127 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 MOSP00540 346 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 IGHV1-46P01743 117 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 HBBP68871 147 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 CCL8P80075 99 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 ZNF788Q6ZQV5 615 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 SSX8Q7RTT4 187 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 RNASE8Q8TDE3 154 aaKnown RBP10.07□□□□□ -0.8
CAPN1-208ENST00000527323 NKX6-3A6NJ46 265 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 H0YJW9 148 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 LINC01560Q8TB33 94 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
CAPN1-208ENST00000527323 ZNF835Q9Y2P0 537 aa10.07□□□□□ -0.8
CAPN1-208ENST00000527323 IGHV3-21A0A0B4J1V1 117 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 A8MWL6 223 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 OR2J3O76001 311 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 P01737 135 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 TIMM23BQ5SRD1 257 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 HCP5Q6MZN7 132 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 ZNF841Q6ZN19 808 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 GPR82Q96P67 336 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 GAL3ST2Q9H3Q3 398 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 MRPL36Q9P0J6 103 aaKnown RBP10.06□□□□□ -0.8
CAPN1-208ENST00000527323 ABCA1O95477 2261 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 CCL21O00585 134 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 ENSAO43768 121 aaKnown RBP10.06□□□□□ -0.8
CAPN1-208ENST00000527323 APELAP0DMC3 54 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 FAM162BQ5T6X4 162 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 SPATA12Q7Z6I5 190 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 RPP21Q9H633 154 aaKnown RBP10.06□□□□□ -0.8
CAPN1-208ENST00000527323 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 NOTCH2Q04721 2471 aa10.06□□□□□ -0.8
CAPN1-208ENST00000527323 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-208ENST00000527323 IGLC7A0M8Q6 106 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 GATA4P43694 442 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 CLEC2AQ6UVW9 174 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 ATP5L2Q7Z4Y8 100 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 PERPQ96FX8 193 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 WASHC3Q9Y3C0 194 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 IGHV1-69-2A0A0G2JMI3 117 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 HSBP1L1C9JCN9 74 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 CHEK1O14757 476 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 CA7P43166 264 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 DIAPH2-AS1Q14236 149 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 FBLN7Q53RD9 439 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 TMEM177Q53S58 311 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 ZNF833PQ6ZTB9 187 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 LINC00173Q6ZV60 143 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 LINC00312Q9Y6C7 94 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 IGLV3-9A0A075B6K5 115 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 IGKV1D-37A0A075B6S9 117 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 SLC25A17O43808 307 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 MUC15Q8N387 334 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 STXBP6Q8NFX7 210 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 OR4F17Q8NGA8 305 aa10.05□□□□□ -0.8
CAPN1-208ENST00000527323 TOX4O94842 621 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 LINC00322Q6ZN03 302 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-208ENST00000527323 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 MCRIP2Q9BUT9 160 aaKnown RBP10.04□□□□□ -0.8
CAPN1-208ENST00000527323 PLXNB1O43157 2135 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 ZFHX3Q15911 3703 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 DOPEY2Q9Y3R5 2298 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 MBD3L4A6NDZ8 208 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-208ENST00000527323 MBD3L3A6NE82 208 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-208ENST00000527323 MBD3L5A6NJ08 208 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-208ENST00000527323 NUDT3O95989 172 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 TMEM30BQ3MIR4 351 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 OR5AN1Q8NGI8 311 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms