RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SELENOTP62341 195 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 LGALSLQ3ZCW2 172 aaPredicted RBP8.07□□□□□ -1.12
NEDD8-205ENST00000527046 GCSAMLQ5JQS6 135 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 OR2K2Q8NGT1 345 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 GINS3Q9BRX5 216 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 PLA2G2EQ9NZK7 142 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 NOTCH1P46531 2555 aa8.07□□□□□ -1.12
NEDD8-205ENST00000527046 NBEAL1Q6ZS30 2694 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 CFDP00746 253 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-205ENST00000527046 ORM2P19652 201 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 EIF2B2P49770 351 aaKnown RBP8.06□□□□□ -1.12
NEDD8-205ENST00000527046 LAMTOR1Q6IAA8 161 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 UHRF2Q96PU4 802 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 METTL26Q96S19 204 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 RSG1Q9BU20 258 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 PBDC1Q9BVG4 233 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 MFFQ9GZY8 342 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 ARV1Q9H2C2 271 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 AURKAIP1Q9NWT8 199 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-205ENST00000527046 RABAC1Q9UI14 185 aa8.06□□□□□ -1.12
NEDD8-205ENST00000527046 TRAV25A0A0B4J276 109 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 ZNF98A6NK75 572 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 H3BRN7 92 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 K7EIL1 84 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 TSPAN4O14817 238 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 MPDU1O75352 247 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 C1QBP02746 253 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 FABP1P07148 127 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 GP9P14770 177 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 LEMD1Q68G75 181 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
NEDD8-205ENST00000527046 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 FAM24BQ8N5W8 94 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 OR1B1Q8NGR6 318 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 PRR25Q96S07 402 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 SHANK2-AS3Q9BTD1 123 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 SCRT1Q9BWW7 348 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 SLC25A39Q9BZJ4 359 aaPredicted RBP8.05□□□□□ -1.12
NEDD8-205ENST00000527046 GPR61Q9BZJ8 451 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 ARL6Q9H0F7 186 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 DOK5Q9P104 306 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 PXMP4Q9Y6I8 212 aa8.05□□□□□ -1.12
NEDD8-205ENST00000527046 TRAV5A0A0B4J249 113 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 HYPMO75409 117 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 SCGB2A1O75556 95 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 CD7P09564 240 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 AP2S1P53680 142 aaPredicted RBP8.04□□□□□ -1.12
NEDD8-205ENST00000527046 ZNF345Q14585 488 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 PXDC1Q5TGL8 231 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 AKAP14Q86UN6 197 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 INO80EQ8NBZ0 244 aaPredicted RBP8.04□□□□□ -1.12
NEDD8-205ENST00000527046 DYNLRB2Q8TF09 96 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 DCANP1Q8TF63 244 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 SLC25A32Q9H2D1 315 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 DNAJC4Q9NNZ3 241 aa8.04□□□□□ -1.12
NEDD8-205ENST00000527046 A0A1W2PS18 150 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 SOCS3O14543 225 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 ATP6V0CP27449 155 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 B2MP61769 119 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 DEFA6Q01524 100 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 C1orf194Q5T5A4 169 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 SPATA31B1PQ5VZV4 182 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 FAM167A-AS1Q96KT0 104 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 CITED4Q96RK1 184 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 SH3BGRL3Q9H299 93 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 SEPSECSQ9HD40 501 aaKnown RBP8.03□□□□□ -1.12
NEDD8-205ENST00000527046 HIGD1AQ9Y241 93 aa8.03□□□□□ -1.12
NEDD8-205ENST00000527046 K7EQG2 157 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 IFNA5P01569 189 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 OR5G3P0C626 314 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 RAB31Q13636 194 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 ODF3L2Q3SX64 289 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 LCN12Q6JVE5 192 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 TMUB2Q71RG4 321 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 LINC00305Q7Z4B0 112 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 GBGT1Q8N5D6 347 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 HSD17B11Q8NBQ5 300 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 SPAG8Q99932 426 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-205ENST00000527046 MS4A6AQ9H2W1 248 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 TIMM9Q9Y5J7 89 aa8.02□□□□□ -1.13
NEDD8-205ENST00000527046 IGKV3-7A0A075B6H7 116 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-205ENST00000527046 A0A0D9SG52 128 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 TAAR5O14804 337 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 EIF3GO75821 320 aaKnown RBP eCLIP8.01□□□□□ -1.13
NEDD8-205ENST00000527046 NUP62P37198 522 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-205ENST00000527046 GUCA2BQ16661 112 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 C10orf113Q5VZT2 155 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 Q6ZRG5 221 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 C9orf62Q8N4C0 152 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 OR2G3Q8NGZ4 309 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 SCGB1C1Q8TD33 95 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 GATAD1Q8WUU5 269 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 HYLS1Q96M11 299 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 WFDC10AQ9H1F0 79 aa8.01□□□□□ -1.13
NEDD8-205ENST00000527046 TRAV2A0A0B4J234 112 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms