RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 OR10P1Q8NGE3 313 aa15.09■□□□□ 0.01
VPS28-206ENST00000526734 OR11H2Q8NH07 326 aa15.09■□□□□ 0.01
VPS28-206ENST00000526734 GPR82Q96P67 336 aa15.09■□□□□ 0.01
VPS28-206ENST00000526734 PTTG2Q9NZH5 202 aa15.09■□□□□ 0.01
VPS28-206ENST00000526734 SMCO3A2RU48 225 aa15.08■□□□□ 0
VPS28-206ENST00000526734 CXorf65A6NEN9 183 aa15.08■□□□□ 0
VPS28-206ENST00000526734 KNCNA6PVL3 124 aa15.08■□□□□ 0
VPS28-206ENST00000526734 PMS2P5A8MQ11 134 aa15.08■□□□□ 0
VPS28-206ENST00000526734 H2AFB2P0C5Z0 115 aa15.08■□□□□ 0
VPS28-206ENST00000526734 PSMB3P49720 205 aa15.08■□□□□ 0
VPS28-206ENST00000526734 PAX9P55771 341 aa15.08■□□□□ 0
VPS28-206ENST00000526734 S100A7AQ86SG5 101 aa15.08■□□□□ 0
VPS28-206ENST00000526734 TMEM147Q9BVK8 224 aa15.08■□□□□ 0
VPS28-206ENST00000526734 MGAT4CQ9UBM8 478 aa15.08■□□□□ 0
VPS28-206ENST00000526734 RCL1Q9Y2P8 373 aaKnown RBP15.08■□□□□ 0
VPS28-206ENST00000526734 STARD9Q9P2P6 4700 aa15.07■□□□□ 0
VPS28-206ENST00000526734 GALR1P47211 349 aa15.07■□□□□ 0
VPS28-206ENST00000526734 C12orf45Q8N5I9 185 aaPredicted RBP15.07■□□□□ 0
VPS28-206ENST00000526734 GGACTQ9BVM4 153 aa15.07■□□□□ 0
VPS28-206ENST00000526734 C1QTNF4Q9BXJ3 329 aa15.07■□□□□ 0
VPS28-206ENST00000526734 NPVFQ9HCQ7 196 aa15.07■□□□□ 0
VPS28-206ENST00000526734 ISLRO14498 428 aa15.06■□□□□ 0
VPS28-206ENST00000526734 MBPP02686 304 aaPredicted RBP15.06■□□□□ 0
VPS28-206ENST00000526734 METTL15P1P0C7V9 234 aa15.06■□□□□ 0
VPS28-206ENST00000526734 CYP2G1PQ6ZSU1 146 aa15.06■□□□□ 0
VPS28-206ENST00000526734 MFFQ9GZY8 342 aa15.06■□□□□ 0
VPS28-206ENST00000526734 TBC1D24Q9ULP9 559 aa15.06■□□□□ 0
VPS28-206ENST00000526734 RNF24Q9Y225 148 aa15.06■□□□□ 0
VPS28-206ENST00000526734 K7EPK0 472 aa15.05■□□□□ -0
VPS28-206ENST00000526734 L7N2F9 121 aa15.05■□□□□ -0
VPS28-206ENST00000526734 IL5P05113 134 aa15.05■□□□□ -0
VPS28-206ENST00000526734 HLA-DRB4P13762 266 aa15.05■□□□□ -0
VPS28-206ENST00000526734 VAMP2P63027 116 aa15.05■□□□□ -0
VPS28-206ENST00000526734 SPATA31B1PQ5VZV4 182 aa15.05■□□□□ -0
VPS28-206ENST00000526734 OR1B1Q8NGR6 318 aa15.05■□□□□ -0
VPS28-206ENST00000526734 SEC22CQ9BRL7 303 aa15.05■□□□□ -0
VPS28-206ENST00000526734 HLA-DRB4X5D2U9 266 aa15.05■□□□□ -0
VPS28-206ENST00000526734 DYNC2H1Q8NCM8 4307 aaKnown RBP15.05■□□□□ -0
VPS28-206ENST00000526734 C7orf66A4D0T2 115 aa15.04■□□□□ -0
VPS28-206ENST00000526734 C5orf51A6NDU8 294 aa15.04■□□□□ -0
VPS28-206ENST00000526734 ZNF98A6NK75 572 aa15.04■□□□□ -0
VPS28-206ENST00000526734 FAM25EA8MYX2 175 aa15.04■□□□□ -0
VPS28-206ENST00000526734 H3BMM0 161 aa15.04■□□□□ -0
VPS28-206ENST00000526734 SOCS3O14543 225 aa15.04■□□□□ -0
VPS28-206ENST00000526734 CCSO14618 274 aa15.04■□□□□ -0
VPS28-206ENST00000526734 UPK1BO75841 260 aa15.04■□□□□ -0
VPS28-206ENST00000526734 GIG44P09565 113 aaPredicted RBP15.04■□□□□ -0
VPS28-206ENST00000526734 ORM2P19652 201 aa15.04■□□□□ -0
VPS28-206ENST00000526734 PLP1P60201 277 aa15.04■□□□□ -0
VPS28-206ENST00000526734 RAP2BP61225 183 aa15.04■□□□□ -0
VPS28-206ENST00000526734 EWSR1Q01844 656 aaKnown RBP eCLIP15.04■□□□□ -0
VPS28-206ENST00000526734 C2orf50Q96LR7 162 aa15.04■□□□□ -0
VPS28-206ENST00000526734 CLUHP3Q96NS8 147 aa15.04■□□□□ -0
VPS28-206ENST00000526734 MIFP14174 115 aa15.03■□□□□ -0
VPS28-206ENST00000526734 PVALBP20472 110 aaPredicted RBP15.03■□□□□ -0
VPS28-206ENST00000526734 C4BPBP20851 252 aa15.03■□□□□ -0
VPS28-206ENST00000526734 PMS2P11Q13670 270 aa15.03■□□□□ -0
VPS28-206ENST00000526734 PXDC1Q5TGL8 231 aa15.03■□□□□ -0
VPS28-206ENST00000526734 CEMP1Q6PRD7 247 aaPredicted RBP15.03■□□□□ -0
VPS28-206ENST00000526734 TEPPQ6URK8 271 aa15.03■□□□□ -0
VPS28-206ENST00000526734 FOXI2Q6ZQN5 318 aa15.03■□□□□ -0
VPS28-206ENST00000526734 ENKURQ8TC29 256 aa15.03■□□□□ -0
VPS28-206ENST00000526734 KLK5Q9Y337 293 aaPredicted RBP15.03■□□□□ -0
VPS28-206ENST00000526734 CSMD3Q7Z407 3707 aa15.03■□□□□ -0
VPS28-206ENST00000526734 TENM2Q9NT68 2774 aa15.02■□□□□ -0
VPS28-206ENST00000526734 ZNF705EA8MWA4 302 aaPredicted RBP15.02■□□□□ -0
VPS28-206ENST00000526734 HYPMO75409 117 aa15.02■□□□□ -0
VPS28-206ENST00000526734 DEDDO75618 318 aa15.02■□□□□ -0
VPS28-206ENST00000526734 LINC00869P0C866 280 aa15.02■□□□□ -0
VPS28-206ENST00000526734 GATA2P23769 480 aaPredicted RBP15.02■□□□□ -0
VPS28-206ENST00000526734 RRAS2P62070 204 aaPredicted RBP15.02■□□□□ -0
VPS28-206ENST00000526734 GSG1LQ6UXU4 331 aa15.02■□□□□ -0
VPS28-206ENST00000526734 ZNF546Q86UE3 836 aa15.02■□□□□ -0
VPS28-206ENST00000526734 SLC25A32Q9H2D1 315 aa15.02■□□□□ -0
VPS28-206ENST00000526734 SLC25A22Q9H936 323 aa15.02■□□□□ -0
VPS28-206ENST00000526734 GPN1Q9HCN4 374 aaPredicted RBP15.02■□□□□ -0
VPS28-206ENST00000526734 BATF3Q9NR55 127 aa15.02■□□□□ -0
VPS28-206ENST00000526734 HIGD1AQ9Y241 93 aa15.02■□□□□ -0
VPS28-206ENST00000526734 H3BRN7 92 aa15.01□□□□□ -0.01
VPS28-206ENST00000526734 CCNKO75909 580 aa15.01□□□□□ -0.01
VPS28-206ENST00000526734 TMEM182Q6ZP80 229 aaPredicted RBP15.01□□□□□ -0.01
VPS28-206ENST00000526734 C11orf45Q8TAV5 145 aa15.01□□□□□ -0.01
VPS28-206ENST00000526734 LINC00052Q96N35 136 aa15.01□□□□□ -0.01
VPS28-206ENST00000526734 SHANK2-AS3Q9BTD1 123 aa15.01□□□□□ -0.01
VPS28-206ENST00000526734 SAV1Q9H4B6 383 aaPredicted RBP15.01□□□□□ -0.01
VPS28-206ENST00000526734 LSM5Q9Y4Y9 91 aaKnown RBP15.01□□□□□ -0.01
VPS28-206ENST00000526734 RYR2Q92736 4967 aa15.01□□□□□ -0.01
VPS28-206ENST00000526734 RPL7P18124 248 aaKnown RBP15□□□□□ -0.01
VPS28-206ENST00000526734 Q8NAQ8 132 aa15□□□□□ -0.01
VPS28-206ENST00000526734 C16orf92Q96LL3 132 aa15□□□□□ -0.01
VPS28-206ENST00000526734 SLC25A39Q9BZJ4 359 aaPredicted RBP15□□□□□ -0.01
VPS28-206ENST00000526734 RPRMQ9NS64 109 aa15□□□□□ -0.01
VPS28-206ENST00000526734 PRAF2O60831 178 aa14.99□□□□□ -0.01
VPS28-206ENST00000526734 BCAP31P51572 246 aa14.99□□□□□ -0.01
VPS28-206ENST00000526734 CAV2P51636 162 aa14.99□□□□□ -0.01
VPS28-206ENST00000526734 EBLN2Q6P2I7 272 aa14.99□□□□□ -0.01
VPS28-206ENST00000526734 CSNK1G2-AS1Q8NCQ2 148 aa14.99□□□□□ -0.01
VPS28-206ENST00000526734 RSG1Q9BU20 258 aa14.99□□□□□ -0.01
VPS28-206ENST00000526734 HRH4Q9H3N8 390 aa14.99□□□□□ -0.01
VPS28-206ENST00000526734 GOSR2O14653 212 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms