RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 TRAV25A0A0B4J276 109 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 KIR2DS1A0A191URI9 304 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 ODAMA1E959 279 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 PRSS37A4D1T9 235 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM231BA6NCW3 169 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A10PA6NDY2 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 HELTA6NFD8 242 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FBLL1A6NHQ2 334 aaKnown RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A8PA6NJQ4 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A7PA6NKC0 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A22PA8MWA6 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A12PA8MX19 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A23PA8MXZ1 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 H0Y980 276 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 PLPP3O14495 311 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 RAB29O14966 203 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 DHHO43323 396 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 SAP30O75446 220 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 NKX2-2O95096 273 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 APCSP02743 223 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 CD55P08174 381 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 ASAH2BP0C7U1 165 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A13PP0C7W8 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 FAM90A24PP0C7X0 464 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 MDKP21741 143 aaPredicted RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 EVI2AP22794 236 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 BLVRBP30043 206 aaPredicted RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 DAP3P51398 398 aaKnown RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 RPL32P62910 135 aaKnown RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 EGR4Q05215 589 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 KIR2DS1Q14954 304 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 Q6Q795 121 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 LYZL2Q7Z4W2 148 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 MMD2Q8IY49 270 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 SAXO1Q8IYX7 474 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 CA13Q8N1Q1 262 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 GCSAMQ8N6F7 178 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 OR10D3Q8NH80 312 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 TSKUQ8WUA8 353 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 TAF15Q92804 592 aaKnown RBP eCLIP4.09□□□□□ -1.75
CD44-218ENST00000525469 PTH2Q96A98 100 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 ARHGAP5-AS1Q96IT6 56 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 VGLL1Q99990 258 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 TMEM147Q9BVK8 224 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 PECRQ9BY49 303 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 MAP1LC3AQ9H492 121 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 GNB4Q9HAV0 340 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 PROK2Q9HC23 129 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 LYRM4Q9HD34 91 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 SCRT2Q9NQ03 307 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 LIN7CQ9NUP9 197 aaKnown RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 SLC25A10Q9UBX3 287 aaPredicted RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 B9D1Q9UPM9 204 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 PSG8Q9UQ74 426 aa4.09□□□□□ -1.75
CD44-218ENST00000525469 CHCHD2Q9Y6H1 151 aaPredicted RBP4.09□□□□□ -1.75
CD44-218ENST00000525469 WNK2Q9Y3S1 2297 aa4.09□□□□□ -1.76
CD44-218ENST00000525469 TRGV10A0A0A0MS01 117 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 TRAV8-6A0A0B4J262 113 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 CENPVL3A0A0U1RRI6 287 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 A0A1W2PP11 408 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 GRIFINA4D1Z8 144 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 SHISA9B4DS77 424 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 F8WDY8 70 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 ERI3O43414 337 aaKnown RBP4.08□□□□□ -1.76
CD44-218ENST00000525469 SYNGR2O43760 224 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 CHST1O43916 411 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 SRSF10O75494 262 aaKnown RBP4.08□□□□□ -1.76
CD44-218ENST00000525469 OR2J3O76001 311 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 LEPROTL1O95214 131 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 MPZL1O95297 269 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 CXorf1O96002 111 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 SPINK8P0C7L1 97 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 CPMP14384 443 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 AREGP15514 252 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 CCL1P22362 96 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 GCSHP23434 173 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 ZFP36P26651 326 aaKnown RBP4.08□□□□□ -1.76
CD44-218ENST00000525469 G6PCP35575 357 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 ASIPP42127 132 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 ZNF83P51522 516 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 EFNA4P52798 201 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 TMEM50BP56557 158 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 RPL27P61353 136 aaKnown RBP4.08□□□□□ -1.76
CD44-218ENST00000525469 TAL2Q16559 108 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 SGCBQ16585 318 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 TIGITQ495A1 244 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 NMSQ5H8A3 153 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 ACSM6Q6P461 480 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 Q6YL49 198 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 Q6ZPA2 131 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 H2BFWTQ7Z2G1 175 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 DTX2Q86UW9 622 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 PPP1R27Q86WC6 154 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 OR13C6PQ8NH95 151 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 NT5CQ8TCD5 201 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 PIFOQ8TCI5 191 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 MRAPQ8TCY5 172 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 C11orf52Q96A22 123 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms