RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 LRRK2Q5S007 2527 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 IGHV1-18A0A0C4DH31 117 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 IGHV2-70DA0A0C4DH43 119 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 TEX50A0A1B0GTY4 177 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 IGLC7A0M8Q6 106 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 PSMB11A5LHX3 300 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 MBD3L4A6NDZ8 208 aaPredicted RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 MBD3L3A6NE82 208 aaPredicted RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 MBD3L5A6NJ08 208 aaPredicted RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 IGLV2-8P01709 118 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 NPSP0C0P6 89 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 CT45A6P0DMU7 189 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 CT45A5P0DMU8 189 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 CT45A7P0DMV0 189 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 CEACAM3P40198 252 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 CSN1S1P47710 185 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 FOXA3P55318 350 aaPredicted RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 SEC11AP67812 179 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 RHOGP84095 191 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 KLRB1Q12918 225 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 CDSNQ15517 529 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 BATFQ16520 125 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 RPL39P5Q59GN2 51 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 SPINK9Q5DT21 86 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 CT45A1Q5HYN5 189 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 PVRIGQ6DKI7 326 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 HIST2H2BCQ6DN03 193 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 SLC25A34Q6PIV7 304 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 ZNF788Q6ZQV5 615 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 ZNF826PQ6ZT77 177 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 ZNF329Q86UD4 541 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 DOLPP1Q86YN1 238 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 LYG1Q8N1E2 194 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 ZCCHC24Q8N2G6 241 aaKnown RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 RBMXL3Q8N7X1 1067 aaKnown RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 CT45A3Q8NHU0 189 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 MBD3L2Q8NHZ7 208 aaPredicted RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 RFESDQ8TAC1 157 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 FLYWCH2Q96CP2 140 aaKnown RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 FAM167A-AS1Q96KT0 104 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 FAM103A1Q9BTL3 118 aaKnown RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 SLC25A2Q9BXI2 301 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 HES7Q9BYE0 225 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 NPFFR1Q9GZQ6 430 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 RNASE7Q9H1E1 156 aaKnown RBP5.4□□□□□ -1.54
ATM-206ENST00000525056 DEFB127Q9H1M4 99 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 TMEM14CQ9P0S9 112 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 EPDR1Q9UM22 224 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 SLC25A15Q9Y619 301 aa5.4□□□□□ -1.54
ATM-206ENST00000525056 SPENQ96T58 3664 aaKnown RBP5.4□□□□□ -1.55
ATM-206ENST00000525056 USP9XQ93008 2570 aaPredicted RBP5.4□□□□□ -1.55
ATM-206ENST00000525056 USP9YO00507 2555 aaPredicted RBP5.39□□□□□ -1.55
ATM-206ENST00000525056 DEFB108AA8MXU0 73 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 K7ERU9 68 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 SCGB2A1O75556 95 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 LEPROTL1O95214 131 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 P01737 135 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 SAA1P0DJI8 122 aaPredicted RBP5.39□□□□□ -1.55
ATM-206ENST00000525056 HNF1AP20823 631 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 MYCNOSP40205 109 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 UQCRFS1P47985 274 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 FABP6P51161 128 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 HIST1H1AQ02539 215 aaPredicted RBP5.39□□□□□ -1.55
ATM-206ENST00000525056 SRSF1Q07955 248 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATM-206ENST00000525056 RIGQ13278 110 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 ALKBH6Q3KRA9 238 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 SPATA31B1PQ5VZV4 182 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 CNEP1R1Q8N9A8 125 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 TEX45Q8NA69 505 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 TMEM116Q8NCL8 245 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 NUP37Q8NFH4 326 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 NUP35Q8NFH5 326 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 OR4C5Q8NGB2 326 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 OR1N2Q8NGR9 330 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 SNRNP40Q96DI7 357 aaKnown RBP5.39□□□□□ -1.55
ATM-206ENST00000525056 HARBI1Q96MB7 349 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 RNF5Q99942 180 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 MLST8Q9BVC4 326 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 CLEC7AQ9BXN2 247 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 PRSS22Q9GZN4 317 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 ZNF355PQ9NSJ1 428 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 PEF1Q9UBV8 284 aaKnown RBP5.39□□□□□ -1.55
ATM-206ENST00000525056 WASHC3Q9Y3C0 194 aa5.39□□□□□ -1.55
ATM-206ENST00000525056 ARHGAP21Q5T5U3 1957 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 OR4C46A6NHA9 309 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 C2orf70A6NJV1 201 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 HIGD1CA8MV81 97 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 SYS1-DBNDD2H3BUS1 97 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 CHEK1O14757 476 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 SIVA1O15304 175 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 TCF21O43680 179 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 CD5LO43866 347 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 FOXH1O75593 365 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 ACTL6BO94805 426 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 FSTL3O95633 263 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 LTAP01374 205 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 RBP4P02753 201 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 SLC25A5P05141 298 aaKnown RBP5.38□□□□□ -1.55
ATM-206ENST00000525056 CRYGCP07315 174 aa5.38□□□□□ -1.55
ATM-206ENST00000525056 DEFA4P12838 97 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms