RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ELLP55199 621 aaPredicted RBP3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 RAP2BP61225 183 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 HBG1P69891 147 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 HBG2P69892 147 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 FGL1Q08830 312 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 VWC2Q2TAL6 325 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 SPATA31B1PQ5VZV4 182 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 FAM90A2PQ658T7 463 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 C16orf54Q6UWD8 224 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 ZNF546Q86UE3 836 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 HSD17B11Q8NBQ5 300 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 OR11H4Q8NGC9 324 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 MARC2Q969Z3 335 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 NARS2Q96I59 477 aaKnown RBP3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 CITED4Q96RK1 184 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 ATP5SQ99766 215 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 NEURL2Q9BR09 285 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 GPR61Q9BZJ8 451 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 MS4A6AQ9H2W1 248 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 VSIRQ9H7M9 311 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 SIGLEC8Q9NYZ4 499 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 TECRQ9NZ01 308 aaKnown RBP3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 FBXL17Q9UF56 701 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 LSM4Q9Y4Z0 139 aaKnown RBP3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 PXMP4Q9Y6I8 212 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 SMAD5-AS1Q9Y6J3 95 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 WNK1Q9H4A3 2382 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 ZNF98A6NK75 572 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 KNCNA6PVL3 124 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 OR11H12B2RN74 326 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 H3BRN7 92 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 TSPAN4O14817 238 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 HMGB3O15347 200 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 BUB3O43684 328 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 COX7A2P2O60397 106 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 HYPMO75409 117 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 FABP1P07148 127 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 FRMD6-AS1P0C7T7 363 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 RPL35AP18077 110 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 HLA-DMBP28068 263 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 DEFB131AP59861 70 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 B2MP61769 119 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 PRR20EP86478 221 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 PRR20CP86479 221 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 PRR20DP86480 221 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 PRR20BP86481 221 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 PRR20AP86496 221 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 OPCMLQ14982 345 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 ATP6V1FQ16864 119 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 ODF3L2Q3SX64 289 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 RPL7L1Q6DKI1 246 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 LAMTOR1Q6IAA8 161 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 SIGLEC15Q6ZMC9 328 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 MIR17HGQ75NE6 70 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 LINC00305Q7Z4B0 112 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 GTSCR1Q86UQ5 136 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 OR8I2Q8N0Y5 310 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 RNF182Q8N6D2 247 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 GLMPQ8WWB7 406 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 TMEM37Q8WXS4 190 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 GRAMD2BQ96HH9 432 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 ST6GAL2Q96JF0 529 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 C17orf77Q96MU5 243 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 GGACTQ9BVM4 153 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 NPCDR1Q9BY65 106 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC25A39Q9BZJ4 359 aaPredicted RBP3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 WDR61Q9GZS3 305 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 SH3BGRL3Q9H299 93 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 ARV1Q9H2C2 271 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC25A32Q9H2D1 315 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 TUBA4BQ9H853 241 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 SRD5A3Q9H8P0 318 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 MAP6D1Q9H9H5 199 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 RETNQ9HD89 108 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC39A9Q9NUM3 307 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 C19orf73Q9NVV2 129 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 TNFSF18Q9UNG2 199 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 HIGD1AQ9Y241 93 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 U3KQE9 123 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 NOTCH3Q9UM47 2321 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 MEGF8Q7Z7M0 2845 aa3.43□□□□□ -1.86
CHMP4A-202ENST00000524955 FBN3Q75N90 2809 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 A0A1W2PS18 150 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 RBMY1BA6NDE4 496 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 RBMY1EA6NEQ0 496 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 OR4C46A6NHA9 309 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 FNDC10F2Z333 226 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 F6UB75 175 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 K7EQG2 157 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 IFNA5P01569 189 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 IGKV3-20P01619 116 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 RBMY1DP0C7P1 496 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 ZNF705DP0CH99 300 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 ZNF705BP0CI00 300 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 PYYP10082 97 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 CXCL2P19875 107 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 NUP62P37198 522 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 NKX2-5P52952 324 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 FXYD7P58549 80 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms