RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TNFAIP8L1Q8WVP5 186 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 PTX4Q96A99 478 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 KCTD14Q9BQ13 255 aaPredicted RBP4.27□□□□□ -1.73
NEDD8-203ENST00000524927 NUDT15Q9NV35 164 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 C21orf62Q9NYP8 219 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 MAGEB4O15481 346 aaPredicted RBP4.26□□□□□ -1.73
NEDD8-203ENST00000524927 DCTN3O75935 186 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 DIRAS1O95057 198 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 GLAP06280 429 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 SAA1P0DJI8 122 aaPredicted RBP4.26□□□□□ -1.73
NEDD8-203ENST00000524927 CXCR4P61073 352 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 B2MP61769 119 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 SNRPD3P62318 126 aaKnown RBP4.26□□□□□ -1.73
NEDD8-203ENST00000524927 LYPD5Q6UWN5 251 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 HSD17B13Q7Z5P4 300 aaPredicted RBP4.26□□□□□ -1.73
NEDD8-203ENST00000524927 MRPL30Q8TCC3 161 aaKnown RBP4.26□□□□□ -1.73
NEDD8-203ENST00000524927 ZNF184Q99676 751 aaPredicted RBP4.26□□□□□ -1.73
NEDD8-203ENST00000524927 CLEC2DQ9UHP7 191 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 RCL1Q9Y2P8 373 aaKnown RBP4.26□□□□□ -1.73
NEDD8-203ENST00000524927 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
NEDD8-203ENST00000524927 IGHV3-66A0A0C4DH42 116 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 ZNF705GA8MUZ8 300 aaPredicted RBP4.25□□□□□ -1.73
NEDD8-203ENST00000524927 GABRPO00591 440 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 ATP8B1O43520 1251 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 RPP14O95059 124 aaKnown RBP4.25□□□□□ -1.73
NEDD8-203ENST00000524927 MRPL3P09001 348 aaKnown RBP4.25□□□□□ -1.73
NEDD8-203ENST00000524927 SLC2A5P22732 501 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 ZBTB25P24278 435 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 RPL13AP40429 203 aaKnown RBP4.25□□□□□ -1.73
NEDD8-203ENST00000524927 MRPS15P82914 257 aaKnown RBP4.25□□□□□ -1.73
NEDD8-203ENST00000524927 DHRS2Q13268 280 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 RBM48Q5RL73 367 aaKnown RBP4.25□□□□□ -1.73
NEDD8-203ENST00000524927 TMEM244Q5VVB8 128 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 EPGNQ6UW88 154 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 FAM220AQ7Z4H9 259 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 WFDC10BQ8IUB3 73 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 OR51E2Q9H255 320 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 ARMC1Q9NVT9 282 aa4.25□□□□□ -1.73
NEDD8-203ENST00000524927 TIMM8BQ9Y5J9 83 aaPredicted RBP4.25□□□□□ -1.73
NEDD8-203ENST00000524927 TRAV26-2A0A0B4J265 109 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 TRDCB7Z8K6 153 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 RGS16O15492 202 aaPredicted RBP4.24□□□□□ -1.73
NEDD8-203ENST00000524927 CRYZL1O95825 349 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 CST1P01037 141 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 ATP6V1B2P21281 511 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 EIF2B2P49770 351 aaKnown RBP4.24□□□□□ -1.73
NEDD8-203ENST00000524927 SNRPGP62308 76 aaKnown RBP4.24□□□□□ -1.73
NEDD8-203ENST00000524927 Q56UQ5 140 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 ZFP41Q8N8Y5 198 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 UBAC2Q8NBM4 344 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 TMEM167AQ8TBQ9 72 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 SLC25A46Q96AG3 418 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 IGF2BP2-AS1Q96M15 143 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 GPER1Q99527 375 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 THTPAQ9BU02 230 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 FAM192AQ9GZU8 254 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 METTL9Q9H1A3 318 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 SLC35B3Q9H1N7 401 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 PEX16Q9Y5Y5 336 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
NEDD8-203ENST00000524927 IGHV1OR15-1A0A075B7D0 117 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 J3QRK9 145 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 FXYD1O00168 92 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 ZNF780AO75290 641 aaPredicted RBP4.23□□□□□ -1.73
NEDD8-203ENST00000524927 ATP5LO75964 103 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 CDRT1O95170 752 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 PRM2P04554 102 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 GTF2F2P13984 249 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 CEACAM6P40199 344 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 PSG9Q00887 426 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 ARFRP1Q13795 201 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 ARL6IP1Q15041 203 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 RCN1Q15293 331 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 TNFAIP8L3Q5GJ75 292 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 SPINK6Q6UWN8 80 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 ACOT7LQ6ZUV0 252 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 SSX6Q7RTT6 188 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 MS4A15Q8N5U1 240 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 OR5D14Q8NGL3 314 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 VSTM2AQ8TAG5 236 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 PGLYRP4Q96LB8 373 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 NXF2Q9GZY0 626 aaKnown RBP4.23□□□□□ -1.73
NEDD8-203ENST00000524927 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
NEDD8-203ENST00000524927 ZFP92A6NM28 416 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 ZNF670-ZNF695F2Z2N8 137 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 LECT2O14960 151 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 NPPAP01160 153 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 SRMP19623 302 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 AP2S1P53680 142 aaPredicted RBP4.22□□□□□ -1.73
NEDD8-203ENST00000524927 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 C9orf129Q5T035 196 aaKnown RBP4.22□□□□□ -1.73
NEDD8-203ENST00000524927 GDF5OSQ5U4N7 250 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 SPATA31B1PQ5VZV4 182 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 TOMM20LQ6UXN7 152 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 FOXI2Q6ZQN5 318 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 SPAG16Q8N0X2 631 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 TMEM252Q8N6L7 170 aa4.22□□□□□ -1.73
NEDD8-203ENST00000524927 C14orf178Q8N769 122 aaPredicted RBP4.22□□□□□ -1.73
NEDD8-203ENST00000524927 Q8N976 141 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms