RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SPATA45Q537H7 98 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 TCF24Q7RTU0 167 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 FBXL15Q9H469 300 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 ZNF492Q9P255 531 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 HIGD1AQ9Y241 93 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 TPRP12270 2363 aaKnown RBP8.82□□□□□ -1
HDAC9-228ENST00000524023 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.82□□□□□ -1
HDAC9-228ENST00000524023 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 RPLP1P05386 114 aaKnown RBP8.82□□□□□ -1
HDAC9-228ENST00000524023 IGLC1P0CG04 106 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 PSG1P11464 419 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 CT83Q5H943 113 aa8.82□□□□□ -1
HDAC9-228ENST00000524023 SRSF12Q8WXF0 261 aaKnown RBP8.82□□□□□ -1
HDAC9-228ENST00000524023 TLN1Q9Y490 2541 aaKnown RBP8.82□□□□□ -1
HDAC9-228ENST00000524023 PPIAL4CA0A0B4J2A2 164 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 A8MWL6 223 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 HSBP1O75506 76 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 PPIAL4GP0DN37 164 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 COX7A1P24310 79 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 G0S2P27469 103 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 LYZP61626 148 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 MMDQ15546 238 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 RPEQ96AT9 228 aa8.81□□□□□ -1
HDAC9-228ENST00000524023 I3L2K1 104 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 P01737 135 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 RBP4P02753 201 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 HBBP68871 147 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 OR2D3Q8NGH3 330 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 GTSF1Q8WW33 167 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 SLC25A39Q9BZJ4 359 aaPredicted RBP8.8□□□□□ -1
HDAC9-228ENST00000524023 WNT10AQ9GZT5 417 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 OTORQ9NRC9 128 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 CEP295Q9C0D2 2601 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 M0R2Z0 102 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 ZNF25P17030 456 aaPredicted RBP8.8□□□□□ -1
HDAC9-228ENST00000524023 RBPJQ06330 500 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 ZNF124Q15973 351 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 RBM14Q96PK6 669 aaKnown RBP8.8□□□□□ -1
HDAC9-228ENST00000524023 RNF5Q99942 180 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 VKORC1Q9BQB6 163 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 TMEM14CQ9P0S9 112 aa8.8□□□□□ -1
HDAC9-228ENST00000524023 FAM181BA6NEQ2 426 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 LY6LH3BQJ8 138 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 IGLC2P0DOY2 106 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 IGLC3P0DOY3 106 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 RNASEKQ6P5S7 137 aaKnown RBP8.79□□□□□ -1
HDAC9-228ENST00000524023 MUC15Q8N387 334 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 LINC01560Q8TB33 94 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 DAZAP1Q96EP5 407 aaKnown RBP8.79□□□□□ -1
HDAC9-228ENST00000524023 UQCR10Q9UDW1 63 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 SOX21Q9Y651 276 aaPredicted RBP8.79□□□□□ -1
HDAC9-228ENST00000524023 A6NNC1 897 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 IGKV1-17P01599 117 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 PLGLAQ15195 96 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 BATFQ16520 125 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 PRR31Q5SQ13 230 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 EBLN2Q6P2I7 272 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 Q86TA4 180 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 OR8B3Q8NGG8 313 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 URB1-AS1Q96HZ7 61 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 PGLYRP4Q96LB8 373 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 OR8B2Q96RD0 313 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 RASL11BQ9BPW5 248 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 GFRA4Q9GZZ7 299 aa8.79□□□□□ -1
HDAC9-228ENST00000524023 TRAV8-1A0A0A6YYK1 113 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 NBL1P41271 181 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 PMCHL1Q16048 86 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 LDLRAD2Q5SZI1 272 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 LCN12Q6JVE5 192 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 RBPMS2Q6ZRY4 209 aaKnown RBP8.78□□□□□ -1
HDAC9-228ENST00000524023 ATOH7Q8N100 152 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 EXOC3-AS1Q8N2X6 119 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 SRSF8Q9BRL6 282 aaKnown RBP8.78□□□□□ -1
HDAC9-228ENST00000524023 LPAR2Q9HBW0 351 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 MUC6Q6W4X9 2439 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 ANKHD1Q8IWZ3 2542 aaKnown RBP8.78□□□□□ -1
HDAC9-228ENST00000524023 FAM231BA6NCW3 169 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 C2orf70A6NJV1 201 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 CNIH1O95406 144 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 IGLV2-11P01706 119 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 HOXB4P17483 251 aaPredicted RBP8.78□□□□□ -1
HDAC9-228ENST00000524023 CIARTQ8N365 385 aaPredicted RBP8.78□□□□□ -1
HDAC9-228ENST00000524023 ONECUT1Q9UBC0 465 aa8.78□□□□□ -1
HDAC9-228ENST00000524023 K7EIM0 57 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 TIMM23O14925 209 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 SIAH2O43255 324 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 BTF3P20290 206 aaKnown RBP8.77□□□□□ -1.01
HDAC9-228ENST00000524023 CD24P25063 80 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 COL8A1P27658 744 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 MAJINQ3KP22 176 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 ZNF672Q499Z4 452 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-228ENST00000524023 FAM162BQ5T6X4 162 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 GOLT1AQ6ZVE7 132 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 KLHDC1Q8N7A1 406 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 LY6G5BQ8NDX9 201 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 TXN2Q99757 166 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 TMEM208Q9BTX3 173 aa8.77□□□□□ -1.01
HDAC9-228ENST00000524023 TOX4O94842 621 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms