RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 ESDP10768 282 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 UBE2G1P62253 170 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 WDR73Q6P4I2 378 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NDUFS7O75251 213 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 MT-ND6P03923 174 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TMEM11P17152 192 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 Q0VG73 95 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 IQCJQ1A5X6 159 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 KLF17Q5JT82 389 aaPredicted RBP8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 Q9H3A6 140 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 KLF12Q9Y4X4 402 aa8.52□□□□□ -1.05
RAB11FIP1-204ENST00000522774 A8MWP6 167 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 BMPR1BO00238 502 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 LINC00322Q6ZN03 302 aaPredicted RBP8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 DYNAPQ8N1N2 210 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 RASL11BQ9BPW5 248 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SLC25A39Q9BZJ4 359 aaPredicted RBP8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 S4R3C0 116 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 M0R1W7 72 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NDUFA3O95167 84 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 PRTN3P24158 256 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TPPP2P59282 170 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 HES1Q14469 280 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 REC114Q7Z4M0 266 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NUP35Q8NFH5 326 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NEU4Q8WWR8 484 aaPredicted RBP8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 GRAMD2BQ96HH9 432 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ATG101Q9BSB4 218 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZNF586Q9NXT0 402 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NAGKQ9UJ70 344 aa8.51□□□□□ -1.05
RAB11FIP1-204ENST00000522774 CDKN1AP38936 164 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SSTP61278 116 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 RPL19P84098 196 aaKnown RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SLAQ13239 276 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 LY6DQ14210 128 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 GDF5OSQ5U4N7 250 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 Q71RC1 249 aaPredicted RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 C5orf17Q8NAS9 161 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 RCHY1Q96PM5 261 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 HSPB9Q9BQS6 159 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 MLST8Q9BVC4 326 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 POLR3KQ9Y2Y1 108 aaPredicted RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 AKAP6Q13023 2319 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 A6NNC1 897 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TOX4O94842 621 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TCRAP04437 139 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZFP36P26651 326 aaKnown RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SRIP30626 198 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 CEACAM3P40198 252 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 PAFAH1B2P68402 229 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NPBQ8NG41 125 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 GPR82Q96P67 336 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NEU1Q99519 415 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SRSF8Q9BRL6 282 aaKnown RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 MRPL27Q9P0M9 148 aaKnown RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 RNF114Q9Y508 228 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 VWC2LB2RUY7 222 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 HLA-DQA1P01909 254 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 USF2Q15853 346 aaPredicted RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 C5orf64Q2M2E5 130 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 VMO1Q7Z5L0 202 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 DTX2Q86UW9 622 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZNF331Q9NQX6 463 aaPredicted RBP8.5□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TRAV8-1A0A0A6YYK1 113 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NDPQ00604 133 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 COX19Q49B96 90 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 PRR31Q5SQ13 230 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 NOL4LQ96MY1 436 aaPredicted RBP8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 HIGD1CA8MV81 97 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TOMM40O96008 361 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 LTAP01374 205 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 APCSP02743 223 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TSKUQ8WUA8 353 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 C17orf77Q96MU5 243 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SAMD10Q9BYL1 202 aa8.49□□□□□ -1.05
RAB11FIP1-204ENST00000522774 HIST1H1EP10412 219 aaKnown RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TCF24Q7RTU0 167 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 BCL6BQ8N143 479 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 FMC1Q96HJ9 113 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TMEM68Q96MH6 324 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TBX15Q96SF7 602 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 TMEM14CQ9P0S9 112 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZNF705FA8MVS1 300 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZNF253O75346 499 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZNF705DP0CH99 300 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZNF705BP0CI00 300 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 HOXB4P17483 251 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 GPR6P46095 362 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 OR10J3Q5JRS4 329 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 KIR3DL3Q8N743 410 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 WIPF2Q8TF74 440 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 FANCD2OSQ96PS1 177 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 OTORQ9NRC9 128 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 BRS3P32247 399 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 ZNF491Q8N8L2 437 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 SHANK2-AS3Q9BTD1 123 aa8.48□□□□□ -1.05
RAB11FIP1-204ENST00000522774 FBXL7Q9UJT9 491 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms