RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TMEM75Q8N9X5 138 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR52R1Q8NGF1 315 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR10AC1Q8NH08 325 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR4C6Q8NH72 309 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 SLC37A2Q8TED4 501 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 TNFAIP8L1Q8WVP5 186 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 LCN9Q8WX39 176 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMEM106AQ96A25 262 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 APOBEC3DQ96AK3 386 aaPredicted RBP1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 MRPS24Q96EL2 167 aaKnown RBP1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 Q96M85 177 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 TSPAN32Q96QS1 320 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 NMNAT3Q96T66 252 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 AMELYQ99218 206 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 ARL6Q9H0F7 186 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 FXYD6Q9H0Q3 95 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 MS4A6AQ9H2W1 248 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 RASL12Q9NYN1 266 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 TAS2R8Q9NYW2 309 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 GLS2Q9UI32 602 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 ANAPC10Q9UM13 185 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 TNFSF18Q9UNG2 199 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 CARHSP1Q9Y2V2 147 aaKnown RBP1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 U3KQK5 164 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 SDK2Q58EX2 2172 aa1.71□□□□□ -2.14
HMGN1P28-201ENST00000521340 IGKV3D-11A0A0A0MRZ8 115 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 TRBV6-7A0A0A0MS04 114 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 A0A0A6YYH2 397 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 A0A0D9SG52 128 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 LOC107986453A0A1B0GWG9 222 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 A6NJ64 397 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 C2orf74A8MZ97 194 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 D6RAR5 112 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 ATP6V1G2-DDX39BF2Z307 99 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 H7C1C5 153 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 K7ERS5 55 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 RPP14O95059 124 aaKnown RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 SIX6O95475 246 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 APODP05090 189 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 ATP5G1P05496 136 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR4E1P0C645 316 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PET100P0DJ07 73 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 C8orf88P0DMB2 117 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 SLC25A4P12235 298 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 ALOX5APP20292 161 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PVALBP20472 110 aaPredicted RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 NFYAP23511 347 aaPredicted RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 AGTR1P30556 359 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 ACTR1BP42025 376 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 GABRA4P48169 554 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 KLF3P57682 345 aaPredicted RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 LCN6P62502 163 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 QRFPP83859 136 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 ZNF117Q03924 483 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR2F1Q13607 317 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 NNATQ16517 81 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 DEFB110Q30KQ9 67 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 CENPWQ5EE01 88 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PABPC1L2AQ5JQF8 200 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 FAM74A1Q5RGS3 127 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 GLT8D1Q68CQ7 371 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 SPNS3Q6ZMD2 512 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 LYG2Q86SG7 212 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 LRP11Q86VZ4 500 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PDZD9Q8IXQ8 264 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 C12orf45Q8N5I9 185 aaPredicted RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMEM251Q8N6I4 163 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 FER1L6-AS1Q8NA97 138 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMEM229BQ8NBD8 167 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PXT1Q8NFP0 134 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR51A4Q8NGJ6 313 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR13C8Q8NGS7 320 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR5AK2Q8NH90 309 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 CCL4L1Q8NHW4 92 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 OTOSQ8NHW6 89 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PATE1Q8WXA2 126 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 AQP3Q92482 292 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 S100A16Q96FQ6 103 aaKnown RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 ARL5BQ96KC2 179 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 RTBDNQ9BSG5 229 aaPredicted RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 NKX6-2Q9C056 277 aaPredicted RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 RNF122Q9H9V4 155 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 TAS2R4Q9NYW5 299 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 MED11Q9P086 117 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 MED13Q9UHV7 2174 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 MRPS16Q9Y3D3 137 aaKnown RBP1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PHLDA3Q9Y5J5 127 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 IER3IP1Q9Y5U9 82 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 PCNX2A6NKB5 2137 aa1.7□□□□□ -2.14
HMGN1P28-201ENST00000521340 TECTAO75443 2155 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 INTS1Q8N201 2190 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 HEATR1Q9H583 2144 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TRANK1O15050 2925 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 SDK1Q7Z5N4 2213 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TRBV24-1A0A075B6N3 115 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TRAV36DV7A0A075B6V5 113 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 A0A0B4J2C4 111 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 A0A1W2PQD3 144 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 KANTRA0A1W2PQU2 76 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms