RNA–Protein interactions for RNA: ENST00000520592.1

CDKL3-204, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 652 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-204ENST00000520592 LYRM7Q5U5X0 104 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 C2orf82Q6UX34 121 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 PDZD9Q8IXQ8 264 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 LINC00052Q96N35 136 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 SMR3AQ99954 134 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 PARD6GQ9BYG4 376 aaPredicted RBP0.17□□□□□ -2.38
CDKL3-204ENST00000520592 UCK1Q9HA47 277 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 KIF1BO60333 1816 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 ADCY9O60503 1353 aa0.17□□□□□ -2.38
CDKL3-204ENST00000520592 RIMBP3CA6NJZ7 1639 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 RIMBP3BA6NNM3 1639 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 RIMBP3Q9UFD9 1639 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 IGLV3-32A0A0A0MS00 114 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 TRAV10A0A0B4J240 114 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 SMIM9A6NGZ8 99 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 F8W1H4 67 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 H3BRM9 83 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 CEBPGP53567 150 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 KRR1Q13601 381 aaKnown RBP0.16□□□□□ -2.38
CDKL3-204ENST00000520592 EDDM3AQ14507 147 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 PTRHD1Q6GMV3 140 aaKnown RBP0.16□□□□□ -2.38
CDKL3-204ENST00000520592 HAGHLQ6PII5 290 aaPredicted RBP0.16□□□□□ -2.38
CDKL3-204ENST00000520592 C4orf22Q6V702 233 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 TEN1Q86WV5 123 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 OR51A2Q8NGJ7 313 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 STAG3L4Q8TBR4 150 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 TMEM138Q9NPI0 162 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 MED29Q9NX70 200 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 IDI2-AS1Q9NZ38 188 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 GLTPQ9NZD2 209 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 PCTPQ9UKL6 214 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 LY96Q9Y6Y9 160 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 FRAS1Q86XX4 4008 aa0.16□□□□□ -2.38
CDKL3-204ENST00000520592 KNTC1P50748 2209 aa0.15□□□□□ -2.38
CDKL3-204ENST00000520592 TRGV10A0A0A0MS01 117 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 A0A0D9SG42 100 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 NDUFB3O43676 98 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 NIPSNAP2O75323 286 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 KDELR1P24390 212 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 ERP29P30040 261 aaKnown RBP0.15□□□□□ -2.39
CDKL3-204ENST00000520592 RANP62826 216 aaKnown RBP0.15□□□□□ -2.39
CDKL3-204ENST00000520592 LINC00575Q6W349 94 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 OR5D14Q8NGL3 314 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 OR10K1Q8NGX5 313 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 PSMF1Q92530 271 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 SLC25A21Q9BQT8 299 aaPredicted RBP0.15□□□□□ -2.39
CDKL3-204ENST00000520592 WFDC10AQ9H1F0 79 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 TMEM133Q9H2Q1 129 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 RTL1A6NKG5 1358 aa0.15□□□□□ -2.39
CDKL3-204ENST00000520592 FAT4Q6V0I7 4981 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 A8MWV9 139 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 CST8O60676 142 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 ERC2-IT1O76042 136 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 HOXA6P31267 233 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 RNASE4P34096 147 aaKnown RBP0.14□□□□□ -2.39
CDKL3-204ENST00000520592 SERPINB9P50453 376 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 PIGPP57054 158 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 HIST1H3AP68431 136 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 H3F3AP84243 136 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 CIRBPQ14011 172 aaKnown RBP0.14□□□□□ -2.39
CDKL3-204ENST00000520592 RRN3P1Q2M238 152 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 TMEM97Q5BJF2 176 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 ZNF431Q8TF32 576 aaPredicted RBP0.14□□□□□ -2.39
CDKL3-204ENST00000520592 CANT1Q8WVQ1 401 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 PPP1R14BQ96C90 147 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 ARL5BQ96KC2 179 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 YPEL2Q96QA6 119 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 PRRT1Q99946 306 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 LINC00467Q9BRT7 94 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 KIFC1Q9BW19 673 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 TMEM126AQ9H061 195 aa0.14□□□□□ -2.39
CDKL3-204ENST00000520592 TRAV23DV6A0A075B6W5 121 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 NUPR2A6NF83 97 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 E7EUB6 86 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 TCRBP04435 133 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 SPINK7P58062 85 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 ROMO1P60602 79 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 LSM6P62312 80 aaKnown RBP0.13□□□□□ -2.39
CDKL3-204ENST00000520592 CDK6Q00534 326 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 MYL5Q02045 173 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 SPA17Q15506 151 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 BCL2L15Q5TBC7 163 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 EIF5AL1Q6IS14 154 aaKnown RBP0.13□□□□□ -2.39
CDKL3-204ENST00000520592 C22orf39Q6P5X5 142 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 ZNF833PQ6ZTB9 187 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 GRINAQ7Z429 371 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 EXOC3-AS1Q8N2X6 119 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 Q8TAT8 98 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 GNPDA2Q8TDQ7 276 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 SIGMAR1Q99720 223 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 RNF122Q9H9V4 155 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 PLAC8Q9NZF1 115 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 MGAMO43451 1857 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 PHRF1Q9P1Y6 1649 aaKnown RBP0.13□□□□□ -2.39
CDKL3-204ENST00000520592 KDM6AO15550 1401 aaPredicted RBP0.13□□□□□ -2.39
CDKL3-204ENST00000520592 PIK3C2GO75747 1445 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 TNS3Q68CZ2 1445 aa0.13□□□□□ -2.39
CDKL3-204ENST00000520592 TRAV4A0A0B4J268 109 aa0.12□□□□□ -2.39
CDKL3-204ENST00000520592 B4DSR2 109 aa0.12□□□□□ -2.39
CDKL3-204ENST00000520592 M0R233 179 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms