RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 DLG5Q8TDM6 1919 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 ANAPC1Q9H1A4 1944 aa0.7□□□□□ -2.3
SKP1-207ENST00000520417 TOPBP1Q92547 1522 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 TCRBV4S1A1TA0A5B7 111 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 DHFRP00374 187 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 IFNA1P01562 189 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 DEFB113Q30KQ7 82 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 C1orf137Q5JT78 98 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 DHRS4L2Q6PKH6 230 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 SOSTDC1Q6X4U4 206 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 EXOC3-AS1Q8N2X6 119 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 C3orf56Q8N813 242 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 Q8N814 137 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 ST6GALNAC3Q8NDV1 305 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 OR13C6PQ8NH95 151 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 PPTC7Q8NI37 304 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 TMEM254Q8TBM7 123 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 BORCS5Q969J3 196 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 ZNF714Q96N38 554 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 NPCDR1Q9BY65 106 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 TMEM133Q9H2Q1 129 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 RNF122Q9H9V4 155 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 C14orf132Q9NPU4 83 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 CDC42SE1Q9NRR8 79 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 GID8Q9NWU2 228 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 PCTPQ9UKL6 214 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 PRNDQ9UKY0 176 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 ZFP30Q9Y2G7 519 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 LY96Q9Y6Y9 160 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 NCOA1Q15788 1441 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 PLXND1Q9Y4D7 1925 aa0.69□□□□□ -2.3
SKP1-207ENST00000520417 HECW1Q76N89 1606 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 ZNF469Q96JG9 3925 aaPredicted RBP0.68□□□□□ -2.3
SKP1-207ENST00000520417 RIIAD1A6NNX1 92 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 A8MWV9 139 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 M0R378 163 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 ATG12O94817 140 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 APOA2P02652 100 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 C1QBP02746 253 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 G0S2P27469 103 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 RNASE4P34096 147 aaKnown RBP0.68□□□□□ -2.3
SKP1-207ENST00000520417 TMBIM6P55061 237 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 UBE2BP63146 152 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 FAM74A1Q5RGS3 127 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 FMN1Q68DA7 1419 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 C22orf39Q6P5X5 142 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 CROCCP2Q86T23 111 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 OR10K1Q8NGX5 313 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 CANT1Q8WVQ1 401 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 ZHX1-C8orf76Q96EF9 292 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 TMEM70Q9BUB7 260 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 TMEM126AQ9H061 195 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 POPDC3Q9HBV1 291 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 SS18L2Q9UHA2 77 aa0.68□□□□□ -2.3
SKP1-207ENST00000520417 SNRNP200O75643 2136 aaKnown RBP0.68□□□□□ -2.3
SKP1-207ENST00000520417 EXPH5Q8NEV8 1989 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 ADGRL3Q9HAR2 1447 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 LOC110117498A0A087WWA1 95 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 GGCTO75223 188 aaKnown RBP0.67□□□□□ -2.3
SKP1-207ENST00000520417 DNAL4O96015 105 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 CD2P06729 351 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 HLA-EP13747 358 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 ZNF25P17030 456 aaPredicted RBP0.67□□□□□ -2.3
SKP1-207ENST00000520417 OGNP20774 298 aaKnown RBP0.67□□□□□ -2.3
SKP1-207ENST00000520417 TCTAP57738 103 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 TAS2R41P59536 307 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 PPP1R2P3Q6NXS1 205 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 C2orf82Q6UX34 121 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 Q8IYB0 196 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 STX19Q8N4C7 294 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 DYDC1Q8WWB3 177 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 MALSU1Q96EH3 234 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 LINC00526Q96FQ7 95 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 TEX37Q96LM6 180 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 OR2J1Q9GZK6 312 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 LYRM2Q9NU23 88 aaPredicted RBP0.67□□□□□ -2.3
SKP1-207ENST00000520417 TAS2R7Q9NYW3 318 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 MED11Q9P086 117 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 UFC1Q9Y3C8 167 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 MED12Q93074 2177 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 NEO1Q92859 1461 aa0.67□□□□□ -2.3
SKP1-207ENST00000520417 MYH10P35580 1976 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 MED1Q15648 1581 aaPredicted RBP0.66□□□□□ -2.3
SKP1-207ENST00000520417 ECM29Q5VYK3 1845 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 ZNF736B4DX44 427 aaPredicted RBP0.66□□□□□ -2.3
SKP1-207ENST00000520417 TMEM256-PLSCR3K7ERE1 68 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 M0R233 179 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 CCL16O15467 120 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 KLF7O75840 302 aaPredicted RBP0.66□□□□□ -2.3
SKP1-207ENST00000520417 IFNA14P01570 189 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 CXCL1P09341 107 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 OR10J4P0C629 311 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 CYBAP13498 195 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 GNG10P50151 68 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 DYNLT3P51808 116 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 CDK6Q00534 326 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 POU6F1Q14863 301 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 GDF5OSQ5U4N7 250 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 TRIQKQ629K1 86 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms