RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 S100A2P29034 98 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 KIAA0141Q14154 515 aaPredicted RBP6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 AKIRIN2Q53H80 203 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 SLC25A24Q6NUK1 477 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 TMEM182Q6ZP80 229 aaPredicted RBP6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 SLC16A13Q7RTY0 426 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 TMEM144Q7Z5S9 345 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 FAM24BQ8N5W8 94 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 SIGLECL1Q8N7X8 197 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 OR5T1Q8NG75 326 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 FAM213BQ8TBF2 198 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 CTDSP1Q9GZU7 261 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 NPVFQ9HCQ7 196 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 TMEM160Q9NX00 188 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 VPREB3Q9UKI3 123 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 HIVEP1P15822 2718 aa6.13□□□□□ -1.43
CTHRC1-203ENST00000520337 IGKV1D-37A0A075B6S9 117 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 SMCO3A2RU48 225 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 H3BQ15 152 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 CORTO00230 105 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 SOX15O60248 233 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 MPDU1O75352 247 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 CLN5O75503 358 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 MT-CO2P00403 227 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 IGF1P05019 195 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 SRP14P37108 136 aaKnown RBP6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 TAGLN2P37802 199 aaKnown RBP6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 OPRK1P41145 380 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 FHITP49789 147 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 SERF2P84101 59 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 AKR1C8PQ5T2L2 129 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 ACSM6Q6P461 480 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 SPSB3Q6PJ21 355 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 UNQ5815/PRO19632Q6UWF5 114 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 LINC00469Q8N7U9 141 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 THAP8Q8NA92 274 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 OR1L6Q8NGR2 347 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 FAM110DQ8TAY7 271 aaPredicted RBP6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 TMEM68Q96MH6 324 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 NIPSNAP3BQ9BS92 247 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 GGTLC1Q9BX51 225 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 VSIRQ9H7M9 311 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 RPRMQ9NS64 109 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 TNFRSF19Q9NS68 423 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 GAR1Q9NY12 217 aaKnown RBP6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 SLC45A2Q9UMX9 530 aa6.12□□□□□ -1.43
CTHRC1-203ENST00000520337 TRBV9A0A0B4J1U6 114 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 IGHV3-21A0A0B4J1V1 117 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 TRAV41A0A0B4J266 112 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 YIF1AO95070 293 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 NDUFB8O95169 186 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 NUDT3O95989 172 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 LINC00869P0C866 280 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 DEFA4P12838 97 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 RPS10P46783 165 aaKnown RBP6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 ECSCRQ19T08 205 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 MIC13Q5XKP0 118 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 ETFRF1Q6IPR1 90 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 RBMS3Q6XE24 437 aaKnown RBP6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 TMEM116Q8NCL8 245 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 MBD3L1Q8WWY6 194 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 NPIPB3Q92617 1050 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 ACY3Q96HD9 319 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 SLC35E1Q96K37 410 aa6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 PUS1Q9Y606 427 aaKnown RBP eCLIP6.11□□□□□ -1.43
CTHRC1-203ENST00000520337 CLDN34H7C241 214 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 PPP1R2P9O14990 202 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 OR2J3O76001 311 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 BRI3O95415 125 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 IFNA1P01562 189 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 PPIFP30405 207 aaKnown RBP6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 OR10J1P30954 320 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 AKR1C3P42330 323 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 RPL29P47914 159 aaKnown RBP6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 RND2P52198 227 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 ELLP55199 621 aaPredicted RBP6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 SSTP61278 116 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 CFHR3Q02985 330 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 RAB31Q13636 194 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 ELOBQ15370 118 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 ZNF726P1Q15940 193 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 TMEM41BQ5BJD5 291 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 GCSAMLQ5JQS6 135 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 C9orf152Q5JTZ5 239 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 FAM209BQ5JX69 171 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 FFAR4Q5NUL3 377 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 RPP25LQ8N5L8 163 aaKnown RBP6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 TMEM86BQ8N661 226 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 ZNF709Q8N972 641 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 OR4X1Q8NH49 305 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 NOL4LQ96MY1 436 aaPredicted RBP6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 ESM1Q9NQ30 184 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 LINC00527Q9UJ94 153 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 ZNF580Q9UK33 172 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 PXMP4Q9Y6I8 212 aa6.1□□□□□ -1.43
CTHRC1-203ENST00000520337 F8P00451 2351 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms