RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TMEM212A6NML5 194 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 CORTO00230 105 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 SPRY2O43597 315 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 CA2P00918 260 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 IGLV2-23P01705 113 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 APOA2P02652 100 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 T-ENOLP0DO92 83 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 CD37P11049 281 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 MYL12AP19105 171 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 TMEM50BP56557 158 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 DEFA5Q01523 94 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 ZNF415Q09FC8 603 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 OR2F1Q13607 317 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 FXYD3Q14802 87 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 RPEL1Q2QD12 228 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 RPL39P5Q59GN2 51 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 DMKNQ6E0U4 476 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 IZUMO2Q6UXV1 221 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 H1FOOQ8IZA3 346 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 SVBPQ8N300 66 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 ADAD2Q8NCV1 583 aaKnown RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 MRPL30Q8TCC3 161 aaKnown RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 RAB2BQ8WUD1 216 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 RNF183Q96D59 192 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 CLCC1Q96S66 551 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 GPER1Q99527 375 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 CMSS1Q9BQ75 279 aaKnown RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 CABLES2Q9BTV7 478 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 NKX6-2Q9C056 277 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 ZNF436Q9C0F3 470 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 ISG20L2Q9H9L3 353 aaKnown RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 TAS2R4Q9NYW5 299 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 ZNF230Q9UIE0 474 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 TRAPPC2LQ9UL33 140 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 WASHC3Q9Y3C0 194 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 LSM5Q9Y4Y9 91 aaKnown RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 U3KQ87 197 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-207ENST00000518716 MCRIP1C9JLW8 97 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 J3QLW9 94 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 LGALS9O00182 355 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 PHOX2AO14813 284 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 RTL8CO15255 209 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 LALBAP00709 142 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 MAS1P04201 325 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 ZNF19P17023 458 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 IGFBP3P17936 291 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-207ENST00000518716 FAM3BP58499 235 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-207ENST00000518716 LINC00205P59089 165 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 HMGN3Q15651 99 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 TMEM78Q5T7P6 136 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 LAMTOR1Q6IAA8 161 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 UQCC3Q6UW78 93 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 TMEM61Q8N0U2 210 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 CBR4Q8N4T8 237 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 GVQW1Q8N7I0 195 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 MCFD2Q8NI22 146 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 GALMQ96C23 342 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 MRPS24Q96EL2 167 aaKnown RBP4.41□□□□□ -1.7
PABPC1-207ENST00000518716 PDCD1LG2Q9BQ51 273 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 PBDC1Q9BVG4 233 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 PECRQ9BY49 303 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 GABARAPL3Q9BY60 117 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 GABARAPL1Q9H0R8 117 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 ZNF355PQ9NSJ1 428 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 APLNQ9ULZ1 77 aa4.41□□□□□ -1.7
PABPC1-207ENST00000518716 DAPL1A0PJW8 107 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 SRRM4A7MD48 611 aaKnown RBP4.4□□□□□ -1.71
PABPC1-207ENST00000518716 NPIPB5A8MRT5 1133 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 NXPH3O95157 252 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 FGF2P09038 288 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 UBBP0CG47 229 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 CBLN1P23435 193 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF93P35789 620 aaPredicted RBP4.4□□□□□ -1.71
PABPC1-207ENST00000518716 RFX2P48378 723 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 ERVFC1-1P60608 527 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.71
PABPC1-207ENST00000518716 RHOBP62745 196 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 RPL24P83731 157 aaKnown RBP4.4□□□□□ -1.71
PABPC1-207ENST00000518716 PLGLAQ15195 96 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 KLK9Q2XQG4 91 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 LIPKQ5VXJ0 399 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF880Q6PDB4 577 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 DHRS11Q6UWP2 260 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 GPHB5Q86YW7 130 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 C15orf54Q8N8G6 183 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 SAMD12Q8N8I0 201 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 OR5AK2Q8NH90 309 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 NPIPB3Q92617 1050 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 PTX4Q96A99 478 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 ST6GAL2Q96JF0 529 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 DNAJC30Q96LL9 226 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 GINS3Q9BRX5 216 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 PSMG3Q9BT73 122 aaPredicted RBP4.4□□□□□ -1.71
PABPC1-207ENST00000518716 CST9LQ9H4G1 147 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
PABPC1-207ENST00000518716 KLK9Q9UKQ9 250 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms