RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 UCHL1P09936 223 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 ZNF728P0DKX0 622 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 FABP2P12104 132 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 SDC2P34741 201 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 RRAS2P62070 204 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 MSRB3Q8IXL7 192 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 IFT20Q8IY31 132 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 TEX29Q8N6K0 151 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 PFN4Q8NHR9 129 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 ERG28Q9UKR5 140 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 MED1Q15648 1581 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 DIP2BQ9P265 1576 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 COL16A1Q07092 1604 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 ZNF407Q9C0G0 2248 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 ZNF638Q14966 1978 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 VIRMAQ69YN4 1812 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 ZFYVE16Q7Z3T8 1539 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 KDM5DQ9BY66 1539 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 FAM135AQ9P2D6 1515 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 NUP210LQ5VU65 1888 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 KDM5CP41229 1560 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 COLCA2A8K830 154 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 F8W036 122 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 EVI2AP22794 236 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 CD24P25063 80 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 COL8A2P25067 703 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 GLYATL3Q5SZD4 288 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 Q6P435 159 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 Q8NDZ9 215 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 CBLN4Q9NTU7 201 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 OR5AC2Q9NZP5 309 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 CALML5Q9NZT1 146 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 MINOS1-NBL1R4GNA1 71 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 OVOS2A0A0J9YW53 1432 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 OVOS2Q6IE36 1432 aa3.35□□□□□ -1.87
CTNNA1-202ENST00000517533 INO80Q9ULG1 1556 aaPredicted RBP3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 IGLV3-16A0A075B6K0 115 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 C11orf86A6NJI1 115 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 C3orf84H3BNL1 204 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 H3BPC8 53 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 C19orf84I3L1E1 186 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 M0R2Z0 102 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 RAB5CP51148 216 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 HBBP68871 147 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 NEDD8Q15843 81 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 TMEM244Q5VVB8 128 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 C22orf39Q6P5X5 142 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 C4orf22Q6V702 233 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 SOSTDC1Q6X4U4 206 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 LINC00305Q7Z4B0 112 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 C3orf56Q8N813 242 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 OR51A4Q8NGJ6 313 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 OR8B2Q96RD0 313 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 GINS4Q9BRT9 223 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 PRADC1Q9BSG0 188 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 ADAT1Q9BUB4 502 aaKnown RBP3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 BAIAP2Q9UQB8 552 aa3.34□□□□□ -1.87
CTNNA1-202ENST00000517533 THADAQ6YHU6 1953 aa3.34□□□□□ -1.88
CTNNA1-202ENST00000517533 UNC13BO14795 1591 aa3.34□□□□□ -1.88
CTNNA1-202ENST00000517533 EIF2AK4Q9P2K8 1649 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 KIDINS220Q9ULH0 1771 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 NUP210Q8TEM1 1887 aaPredicted RBP3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 IGHV1-58A0A0C4DH39 117 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 TRBV7-6A0A0J9YX20 115 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 MEIS3P1A6NDR6 274 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 RPL36A-HNRNPH2H7BZ11 118 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 PLXNB1O43157 2135 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 GNG7O60262 68 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 CREBL2O60519 120 aaPredicted RBP3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 IGF2P01344 180 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 MSMBP08118 114 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 BIKQ13323 160 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 PHF5AQ7RTV0 110 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 SH2D6Q7Z4S9 175 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 PDZD9Q8IXQ8 264 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 DYNAPQ8N1N2 210 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 Q8N9L7 120 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 OR4E2Q8NGC2 313 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 C1orf54Q8WWF1 131 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 AP1S3Q96PC3 154 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 TP53RKQ96S44 253 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 LXNQ9BS40 222 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 NPCDR1Q9BY65 106 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 TCEAL2Q9H3H9 227 aaPredicted RBP3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 TAF9BQ9HBM6 251 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 ROCK2O75116 1388 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 ZMYM4Q5VZL5 1548 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 IQGAP3Q86VI3 1631 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 SHANK3Q9BYB0 1731 aa3.33□□□□□ -1.88
CTNNA1-202ENST00000517533 TMEM235A6NFC5 223 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 ATP6V1G2-DDX39BF2Z307 99 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 SLC22A1O15245 554 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 NDUFB3O43676 98 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 PAEPP09466 180 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 TMEM14EPQ6UXP3 125 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 SLC30A7Q8NEW0 376 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 OR4C6Q8NH72 309 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 YPEL2Q96QA6 119 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 SCRT1Q9BWW7 348 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms