RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 TRPT1Q86TN4 253 aaKnown RBP10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 C12orf45Q8N5I9 185 aaPredicted RBP10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 PPP1R14BQ96C90 147 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 PFDN2Q9UHV9 154 aa10.32□□□□□ -0.76
PDGFRB-202ENST00000517488 C7orf66A4D0T2 115 aa10.31□□□□□ -0.76
PDGFRB-202ENST00000517488 C5orf51A6NDU8 294 aa10.31□□□□□ -0.76
PDGFRB-202ENST00000517488 TSC22D2O75157 780 aa10.31□□□□□ -0.76
PDGFRB-202ENST00000517488 CFDP00746 253 aaPredicted RBP10.31□□□□□ -0.76
PDGFRB-202ENST00000517488 ARL16Q0P5N6 197 aa10.31□□□□□ -0.76
PDGFRB-202ENST00000517488 C1orf194Q5T5A4 169 aa10.31□□□□□ -0.76
PDGFRB-202ENST00000517488 ORM2P19652 201 aa10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 DLK1P80370 383 aa10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 CYP2G1PQ6ZSU1 146 aa10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 OR8I2Q8N0Y5 310 aa10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 BPIFCQ8NFQ6 507 aa10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 GATAD1Q8WUU5 269 aa10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
PDGFRB-202ENST00000517488 K7EPK0 472 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 IL5P05113 134 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 C4BPBP20851 252 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 DEFB1P60022 68 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 OR1B1Q8NGR6 318 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 OR11H2Q8NH07 326 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 ENKURQ8TC29 256 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 C2orf50Q96LR7 162 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 RARRES2Q99969 163 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 FBXL17Q9UF56 701 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 SLC45A2Q9UMX9 530 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 LSM5Q9Y4Y9 91 aaKnown RBP10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 AGRNO00468 2067 aa10.29□□□□□ -0.76
PDGFRB-202ENST00000517488 ZNF98A6NK75 572 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 L7N2F9 121 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 SOCS3O14543 225 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 VAMP2P63027 116 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 C17orf77Q96MU5 243 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 LINC00052Q96N35 136 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 SLC25A32Q9H2D1 315 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 C11orf1Q9H5F2 150 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 SLC25A22Q9H936 323 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 DOK5Q9P104 306 aa10.28□□□□□ -0.76
PDGFRB-202ENST00000517488 LCE6AA0A183 80 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 FNDC10F2Z333 226 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 H3BMM0 161 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 LINC00869P0C866 280 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 SPP1P10451 314 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 BCAP31P51572 246 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 SLC38A11Q08AI6 406 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 IL15RAQ13261 267 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 PMS2P11Q13670 270 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 NRARPQ7Z6K4 114 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 SCRT1Q9BWW7 348 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 NPVFQ9HCQ7 196 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 BATF3Q9NR55 127 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
PDGFRB-202ENST00000517488 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 FAM24AA6NFZ4 105 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 HYPMO75409 117 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 DEDDO75618 318 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 ATF4P18848 351 aaPredicted RBP10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 ID1P41134 155 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 GALR1P47211 349 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 PLP1P60201 277 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 S100A10P60903 97 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 SELENOTP62341 195 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 RSG1Q9BU20 258 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 SLC25A39Q9BZJ4 359 aaPredicted RBP10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 CLEC5AQ9NY25 188 aa10.26□□□□□ -0.77
PDGFRB-202ENST00000517488 H3BRN7 92 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 DEFB4AO15263 64 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 CST7O76096 145 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 HLA-DRB4P13762 266 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 PSMB3P49720 205 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 CAV2P51636 162 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 RAB32Q13637 225 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 TMEM41BQ5BJD5 291 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 TEPPQ6URK8 271 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 TMEM217Q8N7C4 229 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 C20orf173Q96LM9 149 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 SHANK2-AS3Q9BTD1 123 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 GGACTQ9BVM4 153 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 HIGD1AQ9Y241 93 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 HLA-DRB4X5D2U9 266 aa10.25□□□□□ -0.77
PDGFRB-202ENST00000517488 INMT-MINDY4F8WBC2 141 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 ISLRO14498 428 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 SIX6O95475 246 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 OR5G3P0C626 314 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 RAP2BP61225 183 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 CSNK1G2-AS1Q8NCQ2 148 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 UHRF2Q96PU4 802 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 ARL6Q9H0F7 186 aa10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 C11orf68Q9H3H3 251 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms