RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 RNASE11Q8TAA1 199 aaKnown RBP1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 LXNQ9BS40 222 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 PRADC1Q9BSG0 188 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 ADAT1Q9BUB4 502 aaKnown RBP1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 NPCDR1Q9BY65 106 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 HIGD1AQ9Y241 93 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 EML5Q05BV3 1969 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 ADAMTS7Q9UKP4 1686 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 KDM5BQ9UGL1 1544 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 MED23Q9ULK4 1368 aa1.44□□□□□ -2.18
SCARNA3-201ENST00000517097 A2MP01023 1474 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 RIC1Q4ADV7 1423 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 SDK2Q58EX2 2172 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 IGHV1-18A0A0C4DH31 117 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 LOC107984640A0A0U1RRK4 108 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 A0A1B0GVG6 124 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 A0A1W2PNM2 257 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 ODF3BA8MYP8 253 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 G3V3Q6 166 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 RTL8CO15255 209 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 DPM2O94777 84 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 NAPSAO96009 420 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 C1QCP02747 245 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 HTR1AP08908 422 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 SCTP09683 121 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 FABP2P12104 132 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 HLA-EP13747 358 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 SDC2P34741 201 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 FXYD2P54710 66 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 PYDC2Q56P42 97 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 Q5XG85 94 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 DPPA3Q6W0C5 159 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 SOSTDC1Q6X4U4 206 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 PHF5AQ7RTV0 110 aaKnown RBP1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 C3orf56Q8N813 242 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 TCEAL2Q9H3H9 227 aaPredicted RBP1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 PAIP2BQ9ULR5 123 aaKnown RBP1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 SCAF11Q99590 1463 aaKnown RBP1.43□□□□□ -2.18
SCARNA3-201ENST00000517097 IGHV3-64A0A075B6Q5 118 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 IGHV1-58A0A0C4DH39 117 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 TRBV7-6A0A0J9YX20 115 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 C7orf71A4D174 169 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 KRTAP9-6A8MVA2 160 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 C5orf58C9J3I9 102 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 LY6LH3BQJ8 138 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 HIST1H2BKO60814 126 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 SHBGP04278 402 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 HIST1H2BJP06899 126 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 CTSGP08311 255 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 CRYGAP11844 174 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 COX6A1P12074 109 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 CSRP1P21291 193 aaKnown RBP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 FUSP35637 526 aaKnown RBP eCLIP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 RPL35P42766 123 aaKnown RBP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 NDUFA6P56556 154 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 DYNLT1P63172 113 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 HBBP68871 147 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 MYL5Q02045 173 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 HIST1H1AQ02539 215 aaPredicted RBP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 RELAQ04206 551 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 LY6EQ16553 131 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 EIF5AL1Q6IS14 154 aaKnown RBP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 KRTAP5-4Q6L8H1 288 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 RPL13AP3Q6NVV1 102 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 LCN15Q6UWW0 184 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 C4orf22Q6V702 233 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 LINC00305Q7Z4B0 112 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 TCTE3Q8IZS6 198 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 TEX29Q8N6K0 151 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 SLC30A7Q8NEW0 376 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 OR4E2Q8NGC2 313 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 OR51A4Q8NGJ6 313 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 CMTM2Q8TAZ6 248 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 DEDD2Q8WXF8 326 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 AQP3Q92482 292 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 VPS25Q9BRG1 176 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 SMIM3Q9BZL3 60 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 CYTL1Q9NRR1 136 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 MARCOQ9UEW3 520 aaPredicted RBP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 BAIAP2Q9UQB8 552 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 HS3ST2Q9Y278 367 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 U3KQ87 197 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 MUC4Q99102 2169 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 WDR7Q9Y4E6 1490 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 KDM5CP41229 1560 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 RIMS1Q86UR5 1692 aaKnown RBP1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 LAMB2P55268 1798 aa1.42□□□□□ -2.18
SCARNA3-201ENST00000517097 CCDC171Q6TFL3 1326 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 ANK1P16157 1881 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 TNRC6AQ8NDV7 1962 aaKnown RBP1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 MDC1Q14676 2089 aaKnown RBP1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 SLIT2O94813 1529 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 IGLV3-9A0A075B6K5 115 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 A0A096LPI6 279 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 A0A1B0GVY2 172 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 OR51F1A6NGY5 319 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 K7EP13 123 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 SDCBPO00560 298 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms