RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 EIF5AP63241 154 aaKnown RBP-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 HPCAP84074 193 aa-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 SSX2Q16385 188 aa-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 CMTM8Q8IZV2 173 aa-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 MRAP2Q96G30 205 aa-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 PACRGQ96M98 296 aaPredicted RBP-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 NAT8BQ9UHF3 227 aa-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 NINLQ9Y2I6 1382 aa-4.04□□□□□ -3.06
RNU6-539P-201ENST00000516665 C9orf170A2RU37 121 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 C7orf71A4D174 169 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 I3L2K1 104 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 RPA3P35244 121 aaPredicted RBP-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 JOSD1Q15040 202 aaPredicted RBP-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 ACTL10Q5JWF8 245 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 TMEM14EPQ6UXP3 125 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 ELOVL6Q9H5J4 265 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 TP53AIP1Q9HCN2 124 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 TMEM242Q9NWH2 141 aa-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 BLMP54132 1417 aaPredicted RBP-4.05□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIGD1CA8MV81 97 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 G3V318 75 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 APOC4-APOC2K7ER74 178 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 BCE1O60756 84 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 PIAS1O75925 651 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 RGS8P57771 180 aaPredicted RBP-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 DYNLT1P63172 113 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 IFITM2Q01629 132 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 MIR22HGQ0VDD5 57 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 CSAG1Q6PB30 78 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 MGARPQ8TDB4 240 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 SDF2Q99470 211 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 ERGIC3Q9Y282 383 aa-4.06□□□□□ -3.06
RNU6-539P-201ENST00000516665 DOCK1Q14185 1865 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 A0A096LPI6 279 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 CENPXA8MT69 81 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 K7EPI3 171 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 GMFGO60234 142 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 OR4E1P0C645 316 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST1H2BOP23527 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST1H2BBP33778 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 DEKP35659 375 aaKnown RBP-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 MAP3K7CLP57077 242 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST1H2BDP58876 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST1H2BCP62807 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST2H2BEQ16778 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST2H2BFQ5QNW6 126 aaPredicted RBP-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 Q6ZT83 130 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 ARPINQ7Z6K5 226 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 OR13C4Q8NGS5 318 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 OR2T10Q8NGZ9 312 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST1H2BHQ93079 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 SLAMF6Q96DU3 332 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST1H2BNQ99877 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HIST1H2BMQ99879 126 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 HDHD2Q9H0R4 259 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 LYRM4Q9HD34 91 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 OSTCQ9NRP0 149 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 RIMBP3CA6NJZ7 1639 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 RIMBP3BA6NNM3 1639 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 RIMBP3Q9UFD9 1639 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 DLEC1Q9Y238 1755 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 KIAA1549LQ6ZVL6 1849 aa-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 XIRP1Q702N8 1843 aaKnown RBP-4.07□□□□□ -3.06
RNU6-539P-201ENST00000516665 LRBAP50851 2863 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 TRBV6-1A0A0K0K1D8 114 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 CXCR6O00574 342 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 NUP98P52948 1817 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 H2BFSP57053 126 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 LCN2P80188 198 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 TSNQ15631 228 aaKnown RBP-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 PIP5KL1Q5T9C9 394 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 RPL22L1Q6P5R6 122 aaKnown RBP-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 UNQ5815/PRO19632Q6UWF5 114 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 ASCL3Q9NQ33 180 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 RABL2AQ9UBK7 228 aaPredicted RBP-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 LY96Q9Y6Y9 160 aa-4.08□□□□□ -3.06
RNU6-539P-201ENST00000516665 C5orf49A4QMS7 147 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 SLC16A4O15374 487 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 FABP7O15540 132 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 SPAG6O75602 509 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 ELOF1P60002 83 aaKnown RBP-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 DSTNP60981 165 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 VBP1P61758 197 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 RPS24P62847 133 aaKnown RBP-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 INSL4Q14641 139 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 KRTAP19-5Q3LI72 72 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 MRPL21Q7Z2W9 205 aaKnown RBP-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 FAM228AQ86W67 206 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 EIF1ADQ8N9N8 165 aaKnown RBP-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 HAVCR2Q8TDQ0 301 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 POPDC3Q9HBV1 291 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 C3orf18Q9UK00 162 aa-4.09□□□□□ -3.06
RNU6-539P-201ENST00000516665 TLN1Q9Y490 2541 aaKnown RBP-4.1□□□□□ -3.06
RNU6-539P-201ENST00000516665 MED1Q15648 1581 aaPredicted RBP-4.1□□□□□ -3.07
RNU6-539P-201ENST00000516665 GOLGA3Q08378 1498 aa-4.1□□□□□ -3.07
RNU6-539P-201ENST00000516665 NINQ8N4C6 2090 aa-4.1□□□□□ -3.07
RNU6-539P-201ENST00000516665 DNAH17Q9UFH2 4485 aa-4.1□□□□□ -3.07
RNU6-539P-201ENST00000516665 IGHV1-69-2A0A0G2JMI3 117 aa-4.1□□□□□ -3.07
RNU6-539P-201ENST00000516665 A0A0J9YY10 115 aa-4.1□□□□□ -3.07
RNU6-539P-201ENST00000516665 A0A1B0GX78 115 aa-4.1□□□□□ -3.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms