RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 AMIGO2Q86SJ2 522 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 OR8I2Q8N0Y5 310 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 ATP6V0E2Q8NHE4 81 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 ST6GAL2Q96JF0 529 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 VAX2Q9UIW0 290 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 TOMM40O96008 361 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 RNASE2P10153 161 aaKnown RBP8.4□□□□□ -1.06
SMAD1-216ENST00000515527 RPL5P46777 297 aaKnown RBP8.4□□□□□ -1.06
SMAD1-216ENST00000515527 OR10A3P58181 314 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 C2orf76Q3KRA6 126 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 C1orf194Q5T5A4 169 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 IGFL4Q6B9Z1 124 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 SLC35G3Q8N808 338 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 ZNF738Q8NE65 137 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 FAM3DQ96BQ1 224 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 RAB22AQ9UL26 194 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 KIF25-AS1Q9Y6Z4 181 aa8.4□□□□□ -1.06
SMAD1-216ENST00000515527 TRAV8-3A0A0A6YYJ7 113 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 TCRBV3S1A0A5B6 114 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 PPYP01298 95 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 RLN1P04808 185 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 PSMB9P28065 219 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 PPT1P50897 306 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 OR2F1Q13607 317 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 SLC24A4Q8NFF2 622 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
SMAD1-216ENST00000515527 MRPL32Q9BYC8 188 aaKnown RBP8.39□□□□□ -1.07
SMAD1-216ENST00000515527 TMEM272A0A1B0GTI8 110 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 PITX3O75364 302 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 PSG1P11464 419 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 FHL2Q14192 279 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 ZNF846Q147U1 533 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 HSD17B12Q53GQ0 312 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 OR10J3Q5JRS4 329 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 IDNKQ5T6J7 187 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 OR8G2PQ6IF36 304 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 H2BFWTQ7Z2G1 175 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 TMEM17Q86X19 198 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 SLC25A31Q9H0C2 315 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 ANXA10Q9UJ72 324 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 ORC6Q9Y5N6 252 aa8.38□□□□□ -1.07
SMAD1-216ENST00000515527 TRGV4A0A0C4DH28 118 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 PHOX2AO14813 284 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 CBX5P45973 191 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 WNT4P56705 351 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 PRSS54Q6PEW0 395 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 RHOXF1Q8NHV9 184 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 RSG1Q9BU20 258 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 COX11Q9Y6N1 276 aa8.37□□□□□ -1.07
SMAD1-216ENST00000515527 ORM1P02763 201 aa8.36□□□□□ -1.07
SMAD1-216ENST00000515527 PTHLHP12272 177 aa8.36□□□□□ -1.07
SMAD1-216ENST00000515527 GALR1P47211 349 aa8.36□□□□□ -1.07
SMAD1-216ENST00000515527 IBA57Q5T440 356 aaKnown RBP8.36□□□□□ -1.07
SMAD1-216ENST00000515527 GFI1Q99684 422 aa8.36□□□□□ -1.07
SMAD1-216ENST00000515527 CD1AP06126 327 aa8.35□□□□□ -1.07
SMAD1-216ENST00000515527 SLC25A4P12235 298 aa8.35□□□□□ -1.07
SMAD1-216ENST00000515527 OR8A1Q8NGG7 326 aa8.35□□□□□ -1.07
SMAD1-216ENST00000515527 DPH3Q96FX2 82 aa8.35□□□□□ -1.07
SMAD1-216ENST00000515527 AK6Q9Y3D8 172 aaKnown RBP8.35□□□□□ -1.07
SMAD1-216ENST00000515527 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 ZNF485Q8NCK3 441 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 OR1B1Q8NGR6 318 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 NUDCD2Q8WVJ2 157 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 NPIPB3Q92617 1050 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 ACY3Q96HD9 319 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 VGLL1Q99990 258 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 ENY2Q9NPA8 101 aa8.34□□□□□ -1.07
SMAD1-216ENST00000515527 ARGLU1Q9NWB6 273 aaPredicted RBP8.34□□□□□ -1.07
SMAD1-216ENST00000515527 DIMT1Q9UNQ2 313 aaKnown RBP8.34□□□□□ -1.07
SMAD1-216ENST00000515527 TRAV8-1A0A0A6YYK1 113 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 INS-IGF2F8WCM5 200 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 PGLYRP1O75594 196 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-216ENST00000515527 LINC01547P58512 204 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-216ENST00000515527 FGL1Q08830 312 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 CDNFQ49AH0 187 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 FAM122CQ6P4D5 195 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 SPINK6Q6UWN8 80 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 NHLRC2Q8NBF2 726 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 BORCS5Q969J3 196 aa8.33□□□□□ -1.08
SMAD1-216ENST00000515527 MRPL16Q9NX20 251 aaKnown RBP8.33□□□□□ -1.08
SMAD1-216ENST00000515527 TRAV8-2A0A0B4J237 113 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 J3KRW8 73 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 SPINK4O60575 86 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 TIRAPP58753 221 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 LYZP61626 148 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 ARL6IP1Q15041 203 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 CCDC190Q86UF4 302 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 ZNF680Q8NEM1 530 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 RMI2Q96E14 147 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 RRNAD1Q96FB5 475 aaKnown RBP8.32□□□□□ -1.08
SMAD1-216ENST00000515527 ZC2HC1AQ96GY0 325 aa8.32□□□□□ -1.08
SMAD1-216ENST00000515527 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms