RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 INE1O15225 51 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 CCL16O15467 120 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 OR7C1O76099 320 aaPredicted RBP0.37□□□□□ -2.35
NEDD4-211ENST00000514893 DHFRP00374 187 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 IFNA7P01567 189 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 HIST1H3AP68431 136 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 REEP5Q00765 189 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 IAH1Q2TAA2 248 aaPredicted RBP0.37□□□□□ -2.35
NEDD4-211ENST00000514893 SBSPONQ8IVN8 264 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 Q8IYB0 196 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 OR4K15Q8NH41 348 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 ITFG2Q969R8 447 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 CEP19Q96LK0 163 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 ZNF714Q96N38 554 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 YPEL2Q96QA6 119 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 TP53RKQ96S44 253 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 WFDC10AQ9H1F0 79 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 PSTPIP2Q9H939 334 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 TNFSF18Q9UNG2 199 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 NCOA6Q14686 2063 aaPredicted RBP0.37□□□□□ -2.35
NEDD4-211ENST00000514893 SBF1O95248 1867 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 MIA2Q96PC5 1412 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 DOCK3Q8IZD9 2030 aa0.37□□□□□ -2.35
NEDD4-211ENST00000514893 TRAV10A0A0B4J240 114 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 TRAV4A0A0B4J268 109 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 M0R2N4 97 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 TAX1BP3O14907 124 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 ERC2-IT1O76042 136 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 KDELR1P24390 212 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 RNASE4P34096 147 aaKnown RBP0.36□□□□□ -2.35
NEDD4-211ENST00000514893 SNCBQ16143 134 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 EIF5AL1Q6IS14 154 aaKnown RBP0.36□□□□□ -2.35
NEDD4-211ENST00000514893 C22orf39Q6P5X5 142 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 HAGHLQ6PII5 290 aaPredicted RBP0.36□□□□□ -2.35
NEDD4-211ENST00000514893 GOLT1AQ6ZVE7 132 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 PLPP5Q8NEB5 264 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 OR10K1Q8NGX5 313 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 CANT1Q8WVQ1 401 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 LINC00052Q96N35 136 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 LINC00467Q9BRT7 94 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 NPCDR1Q9BY65 106 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 MED29Q9NX70 200 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 SLC22A13Q9Y226 551 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 LY96Q9Y6Y9 160 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 TNS3Q68CZ2 1445 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 MCM3APO60318 1980 aa0.36□□□□□ -2.35
NEDD4-211ENST00000514893 PLB1Q6P1J6 1458 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 DENND4CQ5VZ89 1909 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 IGHV1-58A0A0C4DH39 117 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 A0A1W2PPM0 123 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 FAM159BA6NKW6 160 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 A8MWV9 139 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 G3V2T6 193 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 K7ERJ3 54 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 PPYP01298 95 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 NFYBP25208 207 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 CDK6Q00534 326 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 RRN3P1Q2M238 152 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 Q86TA4 180 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 C12orf45Q8N5I9 185 aaPredicted RBP0.35□□□□□ -2.35
NEDD4-211ENST00000514893 MNS1Q8NEH6 495 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 OR10X1Q8NGY0 326 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 POP5Q969H6 163 aaKnown RBP0.35□□□□□ -2.35
NEDD4-211ENST00000514893 RAB37Q96AX2 223 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 MUCL1Q96DR8 90 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 ZHX1-C8orf76Q96EF9 292 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 OR52A1Q9UKL2 312 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 KDM6AO15550 1401 aaPredicted RBP0.35□□□□□ -2.35
NEDD4-211ENST00000514893 FMN1Q68DA7 1419 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 PCF11O94913 1555 aaKnown RBP0.35□□□□□ -2.35
NEDD4-211ENST00000514893 ARHGEF28Q8N1W1 1705 aaKnown RBP0.35□□□□□ -2.35
NEDD4-211ENST00000514893 MGAMO43451 1857 aa0.35□□□□□ -2.35
NEDD4-211ENST00000514893 PHRF1Q9P1Y6 1649 aaKnown RBP0.35□□□□□ -2.35
NEDD4-211ENST00000514893 TRBV19A0A075B6N1 114 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 ODAMA1E959 279 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 M0R378 163 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 OBSL1O75147 1896 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 GGCTO75223 188 aaKnown RBP0.34□□□□□ -2.36
NEDD4-211ENST00000514893 HAND1O96004 215 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 IFNA6P05013 189 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 CXCL1P09341 107 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 CXCL8P10145 99 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 DYNLT3P51808 116 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 TMBIM6P55061 237 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 NCALDP61601 193 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 TMED2Q15363 201 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 RGS21Q2M5E4 152 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 C1orf134Q5TEV5 83 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 CROCCP2Q86T23 111 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 PPTC7Q8NI37 304 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 ZNF431Q8TF32 576 aaPredicted RBP0.34□□□□□ -2.36
NEDD4-211ENST00000514893 PSMF1Q92530 271 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 PBDC1Q9BVG4 233 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 PBOV1Q9GZY1 135 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 TMEM133Q9H2Q1 129 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 NIT2Q9NQR4 276 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 SCN3AQ9NY46 2000 aa0.34□□□□□ -2.36
NEDD4-211ENST00000514893 COL1A1P02452 1464 aaPredicted RBP0.34□□□□□ -2.36
NEDD4-211ENST00000514893 CECR2Q9BXF3 1484 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms