RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 OR8B2Q96RD0 313 aa6.09□□□□□ -1.44
PDLIM5-219ENST00000514743 SMG1Q96Q15 3661 aaKnown RBP6.09□□□□□ -1.44
PDLIM5-219ENST00000514743 KNTC1P50748 2209 aa6.09□□□□□ -1.44
PDLIM5-219ENST00000514743 DIDO1Q9BTC0 2240 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 TRAV1-1A0A0B4J248 108 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 H3BMG7 143 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 IGLV2-14P01704 120 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 C8orf88P0DMB2 117 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 CA6P23280 308 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 CAMPP49913 170 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 GUSBP1Q15486 140 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 SP5Q6BEB4 398 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM136Q6ZRR5 245 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM70Q9BUB7 260 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM191AQ9H0A3 160 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 RNASE7Q9H1E1 156 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 CCL28Q9NRJ3 127 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 SMIM13P0DJ93 91 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 IGHV1-2P23083 117 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 PLA2G5P39877 138 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 EWSR1Q01844 656 aaKnown RBP eCLIP6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 CR1LQ2VPA4 569 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 OR1L1Q8NH94 360 aa6.08□□□□□ -1.44
PDLIM5-219ENST00000514743 MDFIC2A0A1B0GVS7 189 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 J3QL48 77 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 NBL1P41271 181 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 PSMB3P49720 205 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 FOXC1Q12948 553 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 TESK1Q15569 626 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 PIP4P1Q86T03 277 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 ZNF695Q8IW36 515 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 AJUBAQ96IF1 538 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 DLL3Q9NYJ7 618 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 PRNDQ9UKY0 176 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM89A2RUT3 159 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 WT1P19544 449 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 TRIP6Q15654 476 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 PRR30Q53SZ7 412 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 ZNRF2Q8NHG8 242 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM171Q8WVE6 324 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 RASL10AQ92737 203 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 RDH5Q92781 318 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 A0A0G2JRQ6 117 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 J3QT63 122 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 IGHG3P01860 377 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM219Q86XT9 240 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 C10orf126Q8N4M7 172 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 OR5C1Q8NGR4 320 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 TIMD4Q96H15 378 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 C1orf159Q96HA4 380 aa6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 SSBP3Q9BWW4 388 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-219ENST00000514743 NPIPB11E5RHQ5 1161 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 TM4SF5O14894 197 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 PGLYRP1O75594 196 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 CRYAAP02489 173 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 OR51H1Q8NH63 302 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 IL1F10Q8WWZ1 152 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 RPEQ96AT9 228 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 C21orf62Q9NYP8 219 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 MDFICQ9P1T7 246 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 TCF19Q9Y242 345 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 LRRC30A6NM36 301 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 BMPR1BO00238 502 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 DLL1O00548 723 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 PITX3O75364 302 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 CD3EP07766 207 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 COX8AP10176 69 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 DYNLT3P51808 116 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 HERVK_113P63121 156 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 ID3Q02535 119 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 C9orf153Q5TBE3 101 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 IGFL2Q6UWQ7 119 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 FDCSPQ8NFU4 85 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 OR2T6Q8NHC8 308 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 OR2W1Q9Y3N9 320 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 KIAA2026Q5HYC2 2103 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 IGKV1-39P01597 117 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 IGKV1D-39P04432 117 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 CSN1S1P47710 185 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 SLC38A11Q08AI6 406 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 ZNF497Q6ZNH5 498 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 ATP6V0E2Q8NHE4 81 aa6.06□□□□□ -1.44
PDLIM5-219ENST00000514743 FAM90A26D6RGX4 464 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 LYZL6O75951 148 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 NDUFA7O95182 113 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 TNFAIP6P98066 277 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 HOXA4Q00056 320 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM252Q8N6L7 170 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 ABHD14BQ96IU4 210 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 RETNQ9HD89 108 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 RABAC1Q9UI14 185 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 RAXQ9Y2V3 346 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 FAM236AA0A1B0GUQ0 79 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 FAM236BA0A1B0GV22 79 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 IQCF6A8MYZ5 107 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 OOSP1A8MZH6 123 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 RBP4P02753 201 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 MGST1P10620 155 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms