RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 A0A0G2JLM5 398 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 PRSS46E5RG02 174 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 F2RL2O00254 374 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 PAX2Q02962 417 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 CD69Q07108 199 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 KIR3DS1Q14943 382 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 FAM71F2Q6NXP2 309 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 DUX4L9Q6RFH8 374 aaPredicted RBP7.8□□□□□ -1.16
VCAN-210ENST00000513960 GPR82Q96P67 336 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 EPDR1Q9UM22 224 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 A1L4Q6 167 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 CACNG7P62955 275 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 SPRNQ5BIV9 151 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 PET117Q6UWS5 81 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 RPRMLQ8N4K4 120 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 MRPL32Q9BYC8 188 aaKnown RBP7.79□□□□□ -1.16
VCAN-210ENST00000513960 DLL1O00548 723 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 NBEAP1P0C6P0 100 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 FABP2P12104 132 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 LOXL3P58215 753 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
VCAN-210ENST00000513960 TMEM186Q96B77 213 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 FOXA2Q9Y261 457 aaPredicted RBP7.79□□□□□ -1.16
VCAN-210ENST00000513960 ZNF207O43670 478 aaKnown RBP7.79□□□□□ -1.16
VCAN-210ENST00000513960 TMPRSS3P57727 454 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 RHOGP84095 191 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 PRCDQ00LT1 54 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 RBPMS2Q6ZRY4 209 aaKnown RBP7.79□□□□□ -1.16
VCAN-210ENST00000513960 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 OR10X1Q8NGY0 326 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 FAM215AQ9Y5M1 114 aa7.79□□□□□ -1.16
VCAN-210ENST00000513960 UPK2O00526 184 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 FAM87AP0C7U9 286 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 SUB1P53999 127 aaKnown RBP eCLIP7.78□□□□□ -1.16
VCAN-210ENST00000513960 CR1LQ2VPA4 569 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 IGF2-ASQ6U949 168 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 IGFL3Q6UXB1 125 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 OR1L8Q8NGR8 309 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
VCAN-210ENST00000513960 JKAMPQ9P055 326 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 RABAC1Q9UI14 185 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 RIF1Q5UIP0 2472 aaKnown RBP7.78□□□□□ -1.16
VCAN-210ENST00000513960 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 CT45A6P0DMU7 189 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 CT45A5P0DMU8 189 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 CT45A7P0DMV0 189 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 FAM27E3Q08E93 113 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 Q6ZS92 163 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 SCRT2Q9NQ03 307 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 RBP4P02753 201 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 KLF5Q13887 457 aaPredicted RBP7.78□□□□□ -1.16
VCAN-210ENST00000513960 RASL11AQ6T310 242 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 FAM216BQ8N7L0 139 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 TMEM14BQ9NUH8 114 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 NAV3Q8IVL0 2385 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 SRRM4A7MD48 611 aaKnown RBP7.78□□□□□ -1.16
VCAN-210ENST00000513960 CIDEAO60543 219 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 LHBP01229 141 aa7.78□□□□□ -1.16
VCAN-210ENST00000513960 PRB3Q04118 309 aaPredicted RBP7.78□□□□□ -1.16
VCAN-210ENST00000513960 MEF2CQ06413 473 aaPredicted RBP7.78□□□□□ -1.16
VCAN-210ENST00000513960 LOC400499M0QZD8 3231 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 IGLV3-9A0A075B6K5 115 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 VWC2LB2RUY7 222 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 NCR2O95944 276 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 RNASE2P10153 161 aaKnown RBP7.77□□□□□ -1.17
VCAN-210ENST00000513960 FOXE3Q13461 319 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 URB1-AS1Q96HZ7 61 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 C19orf24Q9BVV8 132 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 K7EMI3 77 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 NDUFS8O00217 210 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 SLC25A17O43808 307 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 C3orf36Q3SXR2 165 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 LINC00322Q6ZN03 302 aaPredicted RBP7.77□□□□□ -1.17
VCAN-210ENST00000513960 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.77□□□□□ -1.17
VCAN-210ENST00000513960 OR4A5Q8NH83 315 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 MRPL20Q9BYC9 149 aaKnown RBP7.77□□□□□ -1.17
VCAN-210ENST00000513960 Q9H3A6 140 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 SEC11AP67812 179 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 RIGQ13278 110 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 PLGLAQ15195 96 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 C17orf58Q2M2W7 97 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 GTSF1Q8WW33 167 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 ZNF257Q9Y2Q1 563 aa7.77□□□□□ -1.17
VCAN-210ENST00000513960 DSPP15924 2871 aaKnown RBP7.77□□□□□ -1.17
VCAN-210ENST00000513960 WNK2Q9Y3S1 2297 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 IGHV1-46P01743 117 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 ARMS2P0C7Q2 107 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 CT45A10P0DMU9 189 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 CD40P25942 277 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 GATA4P43694 442 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 WIPF2Q8TF74 440 aaPredicted RBP7.76□□□□□ -1.17
VCAN-210ENST00000513960 MBD6Q96DN6 1003 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 MS4A6AQ9H2W1 248 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 NCOR1P1Q9H4R4 102 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 OR2J3O76001 311 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 PRSS1P07477 247 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms