RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 NKX2-1P43699 371 aaPredicted RBP5.18□□□□□ -1.58
USP46-208ENST00000512656 SRPXP78539 464 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 LINC00336Q6ZUF6 198 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 CSNK1G2-AS1Q8NCQ2 148 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 SMIM4Q8WVI0 70 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 NPIPB3Q92617 1050 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 GPR146Q96CH1 333 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 RTBDNQ9BSG5 229 aaPredicted RBP5.18□□□□□ -1.58
USP46-208ENST00000512656 NDUFAF3Q9BU61 184 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 NAA50Q9GZZ1 169 aaKnown RBP5.18□□□□□ -1.58
USP46-208ENST00000512656 CLEC5AQ9NY25 188 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 SCP2D1Q9UJQ7 156 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 GPR132Q9UNW8 380 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 TNFRSF18Q9Y5U5 241 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 TMEM56-RWDD3S4R434 201 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 AGRNO00468 2067 aa5.18□□□□□ -1.58
USP46-208ENST00000512656 TEX48A0A1B0GUV7 120 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 SMIM9A6NGZ8 99 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 H3BMM0 161 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 CTDSPLO15194 276 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 BUB3O43684 328 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 AMBPP02760 352 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 PSG1P11464 419 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 ANXA3P12429 323 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 HLA-DRB4P13762 266 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 GPX4P36969 197 aaPredicted RBP5.17□□□□□ -1.58
USP46-208ENST00000512656 CCR6P51684 374 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 KLF9Q13886 244 aaPredicted RBP5.17□□□□□ -1.58
USP46-208ENST00000512656 IL18Q14116 193 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 USF2Q15853 346 aaPredicted RBP5.17□□□□□ -1.58
USP46-208ENST00000512656 NMSQ5H8A3 153 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 SAMD13Q5VXD3 122 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 SPATA31B1PQ5VZV4 182 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 OR8G2PQ6IF36 304 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 GPR141Q7Z602 305 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 CLVS1Q8IUQ0 354 aaPredicted RBP5.17□□□□□ -1.58
USP46-208ENST00000512656 LGI3Q8N145 548 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 OR51G1Q8NGK1 321 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 OR4C16Q8NGL9 310 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 LHFPL5Q8TAF8 219 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 RNF125Q96EQ8 232 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 SLC35E1Q96K37 410 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 NEU1Q99519 415 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 PBDC1Q9BVG4 233 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 XCL2Q9UBD3 114 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 RSL24D1Q9UHA3 163 aaKnown RBP5.17□□□□□ -1.58
USP46-208ENST00000512656 HLA-DRB4X5D2U9 266 aa5.17□□□□□ -1.58
USP46-208ENST00000512656 A0A0B4J2A0 478 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 ZFP92A6NM28 416 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 CTDSP2O14595 271 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 SPART-AS1P0CW21 52 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 SMCO1Q147U7 214 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 C12orf74Q32Q52 190 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 C1orf194Q5T5A4 169 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 FAAP20Q6NZ36 180 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 FOXI2Q6ZQN5 318 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 POM121L12Q8N7R1 296 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 OR51S1Q8NGJ8 323 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 DTD1Q8TEA8 209 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 TMEM170AQ8WVE7 144 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 DIRAS2Q96HU8 199 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 FAM210BQ96KR6 192 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 MIXL1Q9H2W2 232 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 HSPB7Q9UBY9 170 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 SHPKQ9UHJ6 478 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 PKHD1P08F94 4074 aa5.16□□□□□ -1.58
USP46-208ENST00000512656 ANKRD20A5PA0PJZ0 165 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 SNRPGP15A8MWD9 76 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 NXPH3O95157 252 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 CFDP00746 253 aaPredicted RBP5.15□□□□□ -1.59
USP46-208ENST00000512656 AKR1C4P17516 323 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 S100A7P31151 101 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 FAUP35544 74 aaKnown RBP5.15□□□□□ -1.59
USP46-208ENST00000512656 PSMB3P49720 205 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 MEOX2P50222 304 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 RAB11AP62491 216 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 SUPT4H1P63272 117 aaKnown RBP5.15□□□□□ -1.59
USP46-208ENST00000512656 NHLH2Q02577 135 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 EBLN2Q6P2I7 272 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 ZNF705AQ6ZN79 300 aaPredicted RBP5.15□□□□□ -1.59
USP46-208ENST00000512656 OR1S1Q8NH92 325 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 COQ8AQ8NI60 647 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 PPP1R14BQ96C90 147 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 LINC00052Q96N35 136 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 MRPS26Q9BYN8 205 aaKnown RBP5.15□□□□□ -1.59
USP46-208ENST00000512656 RBKSQ9H477 322 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 SAV1Q9H4B6 383 aaPredicted RBP5.15□□□□□ -1.59
USP46-208ENST00000512656 MCUBQ9NWR8 336 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 CELA1Q9UNI1 258 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 GOLT1BQ9Y3E0 138 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 RFNGQ9Y644 331 aa5.15□□□□□ -1.59
USP46-208ENST00000512656 DNAH17Q9UFH2 4485 aa5.14□□□□□ -1.59
USP46-208ENST00000512656 IGHV3OR16-12A0A075B7B8 117 aa5.14□□□□□ -1.59
USP46-208ENST00000512656 DUXBA0A1W2PPF3 345 aa5.14□□□□□ -1.59
USP46-208ENST00000512656 ZNF705FA8MVS1 300 aaPredicted RBP5.14□□□□□ -1.59
USP46-208ENST00000512656 ISLRO14498 428 aa5.14□□□□□ -1.59
USP46-208ENST00000512656 MED6O75586 246 aa5.14□□□□□ -1.59
USP46-208ENST00000512656 IFNA21P01568 189 aa5.14□□□□□ -1.59
USP46-208ENST00000512656 IGKV3-20P01619 116 aa5.14□□□□□ -1.59
USP46-208ENST00000512656 HBE1P02100 147 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms