RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PET100P0DJ07 73 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 MAS1LP35410 378 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 RPL27AP46776 148 aaKnown RBP6.55□□□□□ -1.36
NUP54-211ENST00000512151 SMCO1Q147U7 214 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 LRRC37A5PQ49AS3 106 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 FAM106AQ4KMX7 169 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 SPINK9Q5DT21 86 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 PRSS54Q6PEW0 395 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 ALKAL2Q6UX46 152 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 COMMD7Q86VX2 200 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 UBE2DNLQ8IWF7 75 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 INO80EQ8NBZ0 244 aaPredicted RBP6.55□□□□□ -1.36
NUP54-211ENST00000512151 OR4D5Q8NGN0 318 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 ST8SIA2Q92186 375 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 PHYHIPLQ96FC7 376 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 NDUFA4L2Q9NRX3 87 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.55□□□□□ -1.36
NUP54-211ENST00000512151 IGHV3-35A0A0C4DH35 117 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 FGF2P09038 288 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 SLC25A6P12236 298 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 AREGP15514 252 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 HSPE1P61604 102 aaKnown RBP6.54□□□□□ -1.36
NUP54-211ENST00000512151 IAH1Q2TAA2 248 aaPredicted RBP6.54□□□□□ -1.36
NUP54-211ENST00000512151 MARC2Q969Z3 335 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 AQP10Q96PS8 301 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 ARPC5LQ9BPX5 153 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 COMMD5Q9GZQ3 224 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 SLC25A32Q9H2D1 315 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 MRPL27Q9P0M9 148 aaKnown RBP6.54□□□□□ -1.36
NUP54-211ENST00000512151 PRNDQ9UKY0 176 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 ZNF257Q9Y2Q1 563 aa6.54□□□□□ -1.36
NUP54-211ENST00000512151 IGLC7A0M8Q6 106 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 ACTL6BO94805 426 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 IFNA21P01568 189 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 RLN2P04090 185 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 REG1AP05451 166 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
NUP54-211ENST00000512151 PRCDQ00LT1 54 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 ID3Q02535 119 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 WT1-ASQ06250 92 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 RAB32Q13637 225 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 FAM209BQ5JX69 171 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 LYPD1Q8N2G4 141 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 TTC9CQ8N5M4 171 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 OR1L8Q8NGR8 309 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 OR52E5Q8NH55 327 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 OR1S1Q8NH92 325 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 STOML3Q8TAV4 291 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 HINT2Q9BX68 163 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 RBKSQ9H477 322 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 MDFICQ9P1T7 246 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 HSPB7Q9UBY9 170 aa6.53□□□□□ -1.36
NUP54-211ENST00000512151 MFSD2BA6NFX1 497 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 IFNA17P01571 189 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 MBPP02686 304 aaPredicted RBP6.52□□□□□ -1.37
NUP54-211ENST00000512151 CRYGCP07315 174 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 NUP62P37198 522 aaPredicted RBP6.52□□□□□ -1.37
NUP54-211ENST00000512151 PAX9P55771 341 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 XGP55808 180 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 SPCS3P61009 180 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 POLR2GP62487 172 aaKnown RBP eCLIP6.52□□□□□ -1.37
NUP54-211ENST00000512151 THOC7Q6I9Y2 204 aaKnown RBP6.52□□□□□ -1.37
NUP54-211ENST00000512151 EIF4E3Q8N5X7 224 aaKnown RBP6.52□□□□□ -1.37
NUP54-211ENST00000512151 LRRC20Q8TCA0 184 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 PCNPQ8WW12 178 aaKnown RBP6.52□□□□□ -1.37
NUP54-211ENST00000512151 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 ZNF471Q9BX82 626 aaPredicted RBP6.52□□□□□ -1.37
NUP54-211ENST00000512151 MAGT1Q9H0U3 335 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 CYTL1Q9NRR1 136 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 FKBP11Q9NYL4 201 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 OR5AC2Q9NZP5 309 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 GSKIPQ9P0R6 139 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 X6R8D5 127 aa6.52□□□□□ -1.37
NUP54-211ENST00000512151 OR4C46A6NHA9 309 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 K7EPK0 472 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 TAAR5O14804 337 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 TMEM50AO95807 157 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 IAPPP10997 89 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 TPT1P13693 172 aaKnown RBP6.51□□□□□ -1.37
NUP54-211ENST00000512151 HSD17B13Q7Z5P4 300 aaPredicted RBP6.51□□□□□ -1.37
NUP54-211ENST00000512151 C6orf223Q8N319 242 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 TMEM170AQ8WVE7 144 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 CXorf58Q96LI9 332 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 SPIN2AQ99865 258 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 SPIN2BQ9BPZ2 258 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 C11orf1Q9H5F2 150 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 PFDN2Q9UHV9 154 aa6.51□□□□□ -1.37
NUP54-211ENST00000512151 NPIPB5A8MRT5 1133 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 CEBPZOSA8MTT3 80 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 FAM90A26D6RGX4 464 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 SYNGR2O43760 224 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 SCGB1D2O95969 90 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 OR13C7P0DN81 318 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 RNASE2P10153 161 aaKnown RBP6.5□□□□□ -1.37
NUP54-211ENST00000512151 NKX2-1P43699 371 aaPredicted RBP6.5□□□□□ -1.37
NUP54-211ENST00000512151 ELLP55199 621 aaPredicted RBP6.5□□□□□ -1.37
NUP54-211ENST00000512151 EIF5AP63241 154 aaKnown RBP6.5□□□□□ -1.37
NUP54-211ENST00000512151 BSXQ3C1V8 233 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms