RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 DRAM2Q6UX65 266 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 HEPN1Q6WQI6 88 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 LGI3Q8N145 548 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 GAPTQ8N292 157 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 NATD1Q8N6N6 113 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 YIPF7Q8N8F6 280 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 OR8B12Q8NGG6 310 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 OR52P1PQ8NH57 321 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 OR1L1Q8NH94 360 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 YIPF6Q96EC8 236 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 MRAP2Q96G30 205 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 MRPL48Q96GC5 212 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 CCDC42Q96M95 316 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 GPR22Q99680 433 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 NDFIP1Q9BT67 221 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 CHST5Q9GZS9 411 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 ANGPT4Q9Y264 503 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 POLR1DQ9Y2S0 133 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM14AQ9Y6G1 99 aa2.01□□□□□ -2.09
TOPBP1-208ENST00000511439 TRAV8-6A0A0B4J262 113 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 IGHV1-3A0A0C4DH29 117 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 MIF4GDA9UHW6 222 aaKnown RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 F5H5K5 113 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 H3BUA1 57 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 M0R036 132 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 SULT1B1O43704 296 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 SSNA1O43805 119 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 SMIM24O75264 130 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 ADAP1O75689 374 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 RPP14O95059 124 aaKnown RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 YIF1AO95070 293 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 S1PR2O95136 353 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 TRBV12-3P01733 135 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 RLN2P04090 185 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 RPS17P08708 135 aaKnown RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 CELP19835 753 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 CBLN1P23435 193 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 CRABP2P29373 138 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 SSTR5P35346 364 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 CDKN2CP42773 168 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 NCALDP61601 193 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 LSM6P62312 80 aaKnown RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 RAP1AP62834 184 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 CACNG7P62955 275 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 AESQ08117 197 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 ZNF816Q0VGE8 651 aaPredicted RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 DIAPH2-AS1Q14236 149 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 MMDQ15546 238 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 SNCBQ16143 134 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 CD200R1LQ6Q8B3 271 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 PLET1Q6UQ28 207 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 RPS27LQ71UM5 84 aaKnown RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 LRRC34Q8IZ02 419 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 OR2AE1Q8NHA4 323 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 SLC35B4Q969S0 331 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 OR52E6Q96RD3 313 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 UPK3BQ9BT76 320 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 ZNF430Q9H8G1 570 aaPredicted RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 INIPQ9NRY2 104 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 FGFR1OP2Q9NVK5 253 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 SLC22A13Q9Y226 551 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 YTHDF2Q9Y5A9 579 aaKnown RBP2□□□□□ -2.09
TOPBP1-208ENST00000511439 ORC6Q9Y5N6 252 aa2□□□□□ -2.09
TOPBP1-208ENST00000511439 TRGV10A0A0A0MS01 117 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM189A5PLL7 270 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 OR4C46A6NHA9 309 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 DNASE2O00115 360 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 UPK2O00526 184 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 BPY2O14599 106 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 SOCS1O15524 211 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 MRPS14O60783 128 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 CCDC22O60826 627 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 ENTPD6O75354 484 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 BANF1O75531 89 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 SLC22A5O76082 557 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 ATP6V1G2O95670 118 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 REG1AP05451 166 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 C8orf88P0DMB2 117 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 ATF1P18846 271 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 ALDH3A1P30838 453 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 HOXC5Q00444 222 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 RPL18Q07020 188 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 GLYATL3Q5SZD4 288 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 Q5W150 140 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 LAMTOR1Q6IAA8 161 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 UNQ5815/PRO19632Q6UWF5 114 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 NTM-AS1Q6ZSK4 140 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 OR6V1Q8N148 313 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 OR10X1Q8NGY0 326 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 COQ8AQ8NI60 647 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 CIRBP-AS1Q8TBR5 109 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 RXFP4Q8TDU9 374 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 C15orf40Q8WUR7 153 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 BLNKQ8WV28 456 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 RASSF5Q8WWW0 418 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 SMIM19Q96E16 107 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 OR10C1Q96KK4 312 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 TMEM56Q96MV1 263 aa1.99□□□□□ -2.09
TOPBP1-208ENST00000511439 METTL26Q96S19 204 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms