RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 TMEM41BQ5BJD5 291 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 USMG5Q96IX5 58 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 SGK494Q96LW2 274 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
SMAD1-209ENST00000511125 SULT1A2P50226 295 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 CRIP2P52943 208 aaPredicted RBP6.18□□□□□ -1.42
SMAD1-209ENST00000511125 AWAT1Q58HT5 328 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF343Q6P1L6 599 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 OR8I2Q8N0Y5 310 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 THAP8Q8NA92 274 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 OR1N2Q8NGR9 330 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 DLX4Q92988 240 aaPredicted RBP6.18□□□□□ -1.42
SMAD1-209ENST00000511125 NARS2Q96I59 477 aaKnown RBP6.18□□□□□ -1.42
SMAD1-209ENST00000511125 TRGV9Q99603 122 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 ASCL2Q99929 193 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 RARRES2Q99969 163 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 HIGD1AQ9Y241 93 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 PVRIGQ6DKI7 326 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 RAX2Q96IS3 184 aa6.18□□□□□ -1.42
SMAD1-209ENST00000511125 ACTR3CQ9C0K3 210 aaPredicted RBP6.18□□□□□ -1.42
SMAD1-209ENST00000511125 GGCTO75223 188 aaKnown RBP6.17□□□□□ -1.42
SMAD1-209ENST00000511125 MPDU1O75352 247 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 DEFB1P60022 68 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 CST9LP1Q5W188 147 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF600Q6ZNG1 722 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 UBE2E2Q96LR5 201 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 SLC25A39Q9BZJ4 359 aaPredicted RBP6.17□□□□□ -1.42
SMAD1-209ENST00000511125 EIF5A2Q9GZV4 153 aaKnown RBP6.17□□□□□ -1.42
SMAD1-209ENST00000511125 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.17□□□□□ -1.42
SMAD1-209ENST00000511125 LGALS1P09382 135 aaKnown RBP6.17□□□□□ -1.42
SMAD1-209ENST00000511125 RANP62826 216 aaKnown RBP6.17□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF767PQ75MW2 155 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 C3orf56Q8N813 242 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 I3L521 148 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 CCL24O00175 119 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 TOMM40O96008 361 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 NPPCP23582 126 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 SERF2P84101 59 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 TOR2AQ5JU69 321 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 PSMG3Q9BT73 122 aaPredicted RBP6.17□□□□□ -1.42
SMAD1-209ENST00000511125 RABAC1Q9UI14 185 aa6.17□□□□□ -1.42
SMAD1-209ENST00000511125 PKD1L1Q8TDX9 2849 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 TRAV30A0A087WSZ9 112 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 SCAF4O95104 1147 aaKnown RBP6.16□□□□□ -1.42
SMAD1-209ENST00000511125 HLA-DMBP28068 263 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 SELENOTP62341 195 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 RHOBP62745 196 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 IL34Q6ZMJ4 242 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF414Q96IQ9 312 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 C16orf95Q9H693 158 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF98A6NK75 572 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 PAGE4O60829 102 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 PF4P02776 101 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 CDX1P47902 265 aaPredicted RBP6.16□□□□□ -1.42
SMAD1-209ENST00000511125 FAM106AQ4KMX7 169 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 LRRC20Q8TCA0 184 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 RXFP4Q8TDU9 374 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 ELOVL1Q9BW60 279 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 FUT9Q9Y231 359 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 TSSC4Q9Y5U2 329 aaPredicted RBP6.16□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 UBE2L3P68036 154 aaKnown RBP6.16□□□□□ -1.42
SMAD1-209ENST00000511125 RELQ04864 619 aaPredicted RBP6.16□□□□□ -1.42
SMAD1-209ENST00000511125 FOXL1Q12952 345 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 COMMD7Q86VX2 200 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 LURAP1LQ8IV03 231 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 WFDC12Q8WWY7 111 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 METTL26Q96S19 204 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 RNF2Q99496 336 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 MDFIQ99750 246 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 SLC25A2Q9BXI2 301 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 ZFAND3Q9H8U3 227 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 TREM1Q9NP99 234 aa6.16□□□□□ -1.42
SMAD1-209ENST00000511125 UMAD1C9J7I0 102 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 LINC01619G3V211 115 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 H3BQ15 152 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 H3BUA1 57 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 YPEL3P61236 119 aaPredicted RBP6.15□□□□□ -1.42
SMAD1-209ENST00000511125 SPSB3Q6PJ21 355 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 EXOC3-AS1Q8N2X6 119 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 STXBP6Q8NFX7 210 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 ZNF503Q96F45 646 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 PAXXQ9BUH6 204 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 RHPN1-AS1Q9BWJ2 59 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 TIMM9Q9Y5J7 89 aa6.15□□□□□ -1.42
SMAD1-209ENST00000511125 CTXND1A0A1B0GTU2 59 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 TSPAN4O14817 238 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 SCGB2A1O75556 95 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 NDUFA7O95182 113 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 FABP1P07148 127 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 ZNF705DP0CH99 300 aaPredicted RBP6.15□□□□□ -1.43
SMAD1-209ENST00000511125 ZNF705BP0CI00 300 aaPredicted RBP6.15□□□□□ -1.43
SMAD1-209ENST00000511125 C8orf88P0DMB2 117 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 RNF182Q8N6D2 247 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 OR1L4Q8NGR5 311 aa6.15□□□□□ -1.43
SMAD1-209ENST00000511125 AURKAIP1Q9NWT8 199 aaPredicted RBP6.15□□□□□ -1.43
SMAD1-209ENST00000511125 WI2-2373I1.2A0A1W2PRP0 233 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 FNDC10F2Z333 226 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 MBP02144 154 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms