RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 UNQ9165/PRO28630Q6UXU0 137 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 LINC00596Q86U02 117 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 MDP1Q86V88 176 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 PRR15Q8IV56 129 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 DRAM1Q8N682 238 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 RNF182Q8N6D2 247 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.47□□□□□ -2.01
NUP54-209ENST00000510569 OR51A4Q8NGJ6 313 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 OR4C16Q8NGL9 310 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 OR10D4PQ8NGN7 298 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 SLC25A40Q8TBP6 338 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 MRPL30Q8TCC3 161 aaKnown RBP2.47□□□□□ -2.01
NUP54-209ENST00000510569 SCGB1C1Q8TD33 95 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 RPS4Y2Q8TD47 263 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 TWIST2Q8WVJ9 160 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 CCL13Q99616 98 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 THTPAQ9BU02 230 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 SLC25A2Q9BXI2 301 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 NKX6-2Q9C056 277 aaPredicted RBP2.47□□□□□ -2.01
NUP54-209ENST00000510569 POLR2J2Q9GZM3 115 aaKnown RBP2.47□□□□□ -2.01
NUP54-209ENST00000510569 POLR2J3Q9H1A7 115 aaKnown RBP2.47□□□□□ -2.01
NUP54-209ENST00000510569 GTSF1LQ9H1H1 148 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 RNF122Q9H9V4 155 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 LHX9Q9NQ69 397 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 FBXL12Q9NXK8 326 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 SCN3BQ9NY72 215 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 AK3Q9UIJ7 227 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 CYSLTR1Q9Y271 337 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 RNF11Q9Y3C5 154 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 F11RQ9Y624 299 aaKnown RBP2.47□□□□□ -2.01
NUP54-209ENST00000510569 V9GYS6 101 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 PLXNA4Q9HCM2 1894 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 BRCA2P51587 3418 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 C2orf16Q68DN1 1984 aa2.47□□□□□ -2.01
NUP54-209ENST00000510569 CCL15-CCL14A0A0B4J2E2 113 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 DPRXA6NFQ7 191 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 LEUTXA8MZ59 168 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 CLDN25C9JDP6 229 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 GABARAPH6UMI1 98 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 M0R1X1 148 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 LGALS9O00182 355 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 NPFFO15130 113 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 DEDDO75618 318 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 ZNF728P0DKX0 622 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 TDGF1P13385 188 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 HIST1H1DP16402 221 aaKnown RBP2.46□□□□□ -2.02
NUP54-209ENST00000510569 NTF3P20783 257 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 COX7A1P24310 79 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 OPRK1P41145 380 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 GUCA1AP43080 201 aaPredicted RBP2.46□□□□□ -2.02
NUP54-209ENST00000510569 NDUFA6P56556 154 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 DEFA3P59666 94 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 RPL23P62829 140 aaKnown RBP2.46□□□□□ -2.02
NUP54-209ENST00000510569 CRADDP78560 199 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 RTL8BQ17RB0 113 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 VMA21Q3ZAQ7 101 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 LRRC10Q5BKY1 277 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 BCL2L15Q5TBC7 163 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 GLT8D1Q68CQ7 371 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 ZCCHC23Q6ZST2 131 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 PRNTQ86SH4 94 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 KTN1-AS1Q86SY8 53 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 KRTAP13-1Q8IUC0 172 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 C1orf174Q8IYL3 243 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 SLC22A24Q8N4F4 322 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 PACRGLQ8N7B6 248 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 YIPF7Q8N8F6 280 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 OR4S1Q8NGB4 309 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 PPTC7Q8NI37 304 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 FNDC9Q8TBE3 224 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 PP6455Q8WZ26 134 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 KCNS1Q96KK3 526 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 C2orf50Q96LR7 162 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 AP1S3Q96PC3 154 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 PKMYT1Q99640 499 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 CXCL16Q9H2A7 254 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 TMEM133Q9H2Q1 129 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 LINC00597Q9H2U6 94 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 SLC25A22Q9H936 323 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 CCL28Q9NRJ3 127 aa2.46□□□□□ -2.02
NUP54-209ENST00000510569 SOX21Q9Y651 276 aaPredicted RBP2.46□□□□□ -2.02
NUP54-209ENST00000510569 MYO16Q9Y6X6 1858 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 PIKFYVEQ9Y2I7 2098 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 PLXND1Q9Y4D7 1925 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 TRBV7-6A0A0J9YX20 115 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 DHRS12A0PJE2 317 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 IZUMO1RA6ND01 250 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 TLCD2A6NGC4 264 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 GGT3PA6NGU5 568 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 B4DEV8 164 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 GGTLC3B5MD39 225 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 C4orf51C9J302 202 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 H0YJW9 148 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 DNASE2O00115 360 aaPredicted RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 LST1O00453 97 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 PGLYRP1O75594 196 aaPredicted RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 TNFSF13O75888 250 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 IGLV3-27P01718 113 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 BGLAPP02818 100 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 CHTF8P0CG12 524 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms