RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TMEM189A5PLL7 270 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 CCL21O00585 134 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 C17orf58Q2M2W7 97 aa12.1□□□□□ -0.47
USP38-202ENST00000510377 IGHV3-23P01764 117 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 ATP5IP56385 69 aaPredicted RBP12.09□□□□□ -0.47
USP38-202ENST00000510377 GTF2H5Q6ZYL4 71 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 P0C879 139 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 NAV3Q8IVL0 2385 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 DOPEY2Q9Y3R5 2298 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 GCSHP23434 173 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 ZNF329Q86UD4 541 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 IGHV3OR16-13A0A075B7E8 117 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 IGHV3-74A0A0B4J1X5 117 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 A0A1B0GWJ7 208 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 GAFA1Q96PS6 74 aa12.09□□□□□ -0.47
USP38-202ENST00000510377 A6NDN8 102 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 TM4SF5O14894 197 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 UBE2V1Q13404 147 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 THYN1Q9P016 225 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 TDGF1P13385 188 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 TCF15Q12870 199 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 TP53TG3Q9ULZ0 132 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 DIAPH2-AS1Q14236 149 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
USP38-202ENST00000510377 COX11Q9Y6N1 276 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
USP38-202ENST00000510377 IGKV1OR2-108A0A075B7D4 117 aa12.07□□□□□ -0.48
USP38-202ENST00000510377 SLC25A2Q9BXI2 301 aa12.07□□□□□ -0.48
USP38-202ENST00000510377 H0YJW9 148 aa12.07□□□□□ -0.48
USP38-202ENST00000510377 CLEC3BP05452 202 aa12.07□□□□□ -0.48
USP38-202ENST00000510377 LY6DQ14210 128 aa12.07□□□□□ -0.48
USP38-202ENST00000510377 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
USP38-202ENST00000510377 SYS1-DBNDD2H3BUS1 97 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 GPR183P32249 361 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 LGALS7P47929 136 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 BSPH1Q075Z2 132 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 ZNF474Q6S9Z5 364 aaPredicted RBP12.06□□□□□ -0.48
USP38-202ENST00000510377 SLC25A48Q6ZT89 311 aaKnown RBP12.06□□□□□ -0.48
USP38-202ENST00000510377 PNKDQ8N490 385 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 FMC1Q96HJ9 113 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 RNF114Q9Y508 228 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 C17orf100A8MU93 164 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 PSG1P11464 419 aa12.06□□□□□ -0.48
USP38-202ENST00000510377 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 EBLN2Q6P2I7 272 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 TEX45Q8NA69 505 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 TIMD4Q96H15 378 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 A0A1W2PNU3 283 aaPredicted RBP12.05□□□□□ -0.48
USP38-202ENST00000510377 H3BUT2 72 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 TCRAP04437 139 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 TMEM249Q2WGJ8 235 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 TP73-AS1Q9UF72 201 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 SMIM27A0A1W2PRY6 76 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 OR2T8A6NH00 312 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 ORAOV1Q8WV07 137 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 IGKV3-7A0A075B6H7 116 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 KLF17Q5JT82 389 aaPredicted RBP12.05□□□□□ -0.48
USP38-202ENST00000510377 LYPD2Q6UXB3 125 aa12.05□□□□□ -0.48
USP38-202ENST00000510377 ZFYVE26Q68DK2 2539 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 KIAA1549Q9HCM3 1950 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 IGHV1-69-2A0A0G2JMI3 117 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 A0A1W2PPI3 338 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 LINC00173Q6ZV60 143 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 PEF1Q9UBV8 284 aaKnown RBP12.04□□□□□ -0.48
USP38-202ENST00000510377 CEP192Q8TEP8 1941 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 CCL25O15444 150 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 PLA2G2CQ5R387 149 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 ZNF788Q6ZQV5 615 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 C7orf71A4D174 169 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 M0R3E3 92 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 CACNG7P62955 275 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 GAGE1Q13065 139 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
USP38-202ENST00000510377 EXPH5Q8NEV8 1989 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 IGHV3-49A0A0A0MS15 119 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 CD3EP07766 207 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 RELQ04864 619 aaPredicted RBP12.03□□□□□ -0.48
USP38-202ENST00000510377 MSMPQ1L6U9 139 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 C1orf229Q6ZS94 237 aaPredicted RBP12.03□□□□□ -0.48
USP38-202ENST00000510377 MRPL52Q86TS9 123 aaKnown RBP12.03□□□□□ -0.48
USP38-202ENST00000510377 ZNF414Q96IQ9 312 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 RIPPLY3P57055 190 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 PPIAL4CA0A0B4J2A2 164 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 PPIAL4GP0DN37 164 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
USP38-202ENST00000510377 PPIFP30405 207 aaKnown RBP12.03□□□□□ -0.48
USP38-202ENST00000510377 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
USP38-202ENST00000510377 CCDC168Q8NDH2 2452 aa12.03□□□□□ -0.48
USP38-202ENST00000510377 TMEM167AQ8TBQ9 72 aa12.02□□□□□ -0.48
USP38-202ENST00000510377 IGHV3-66A0A0C4DH42 116 aa12.02□□□□□ -0.49
USP38-202ENST00000510377 A1L4Q6 167 aa12.02□□□□□ -0.49
USP38-202ENST00000510377 CNTFRP26992 372 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms