RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 U3KQ87 197 aa11.2□□□□□ -0.62
RAB40C-202ENST00000509637 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
RAB40C-202ENST00000509637 PITX3O75364 302 aa11.19□□□□□ -0.62
RAB40C-202ENST00000509637 FCN2Q15485 313 aa11.19□□□□□ -0.62
RAB40C-202ENST00000509637 IL22RA2Q969J5 263 aa11.19□□□□□ -0.62
RAB40C-202ENST00000509637 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
RAB40C-202ENST00000509637 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 ANKRD20A5PA0PJZ0 165 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 ZFP92A6NM28 416 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 ZNF705GA8MUZ8 300 aaPredicted RBP11.18□□□□□ -0.62
RAB40C-202ENST00000509637 DISC1C4P0D8 188 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 AKAIN1P0CW23 69 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 AZU1P20160 251 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 GATA2P23769 480 aaPredicted RBP11.18□□□□□ -0.62
RAB40C-202ENST00000509637 GPX4P36969 197 aaPredicted RBP11.18□□□□□ -0.62
RAB40C-202ENST00000509637 CCR6P51684 374 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 SSBP1Q04837 148 aaKnown RBP11.18□□□□□ -0.62
RAB40C-202ENST00000509637 SMCO1Q147U7 214 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.18□□□□□ -0.62
RAB40C-202ENST00000509637 A0A0B4J2A0 478 aa11.17□□□□□ -0.62
RAB40C-202ENST00000509637 ISLRO14498 428 aa11.17□□□□□ -0.62
RAB40C-202ENST00000509637 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
RAB40C-202ENST00000509637 THAP8Q8NA92 274 aa11.17□□□□□ -0.62
RAB40C-202ENST00000509637 AP3S1Q92572 193 aa11.17□□□□□ -0.62
RAB40C-202ENST00000509637 TRGV9Q99603 122 aa11.17□□□□□ -0.62
RAB40C-202ENST00000509637 SOSTQ9BQB4 213 aa11.17□□□□□ -0.62
RAB40C-202ENST00000509637 SHPKQ9UHJ6 478 aa11.17□□□□□ -0.62
RAB40C-202ENST00000509637 M0R2Z0 102 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 CTDSPLO15194 276 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 HBE1P02100 147 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 IAPPP10997 89 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 ID1P41134 155 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 RRN3P1Q2M238 152 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 NOXA1Q86UR1 476 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 OR11H7Q8NGC8 314 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 COQ8AQ8NI60 647 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 IGF2BP2-AS1Q96M15 143 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 GOLT1BQ9Y3E0 138 aa11.16□□□□□ -0.62
RAB40C-202ENST00000509637 APOBP04114 4563 aaKnown RBP11.16□□□□□ -0.62
RAB40C-202ENST00000509637 SNRPGP15A8MWD9 76 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 RGS5O15539 181 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 AKR1C4P17516 323 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 ALDH3B2P48448 385 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 DAD1P61803 113 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 OR8I2Q8N0Y5 310 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 RSG1Q9BU20 258 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 MRPS26Q9BYN8 205 aaKnown RBP11.15□□□□□ -0.62
RAB40C-202ENST00000509637 DOK5Q9P104 306 aa11.15□□□□□ -0.62
RAB40C-202ENST00000509637 ZNF98A6NK75 572 aa11.14□□□□□ -0.63
RAB40C-202ENST00000509637 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
RAB40C-202ENST00000509637 MRPS10P82664 201 aaKnown RBP11.14□□□□□ -0.63
RAB40C-202ENST00000509637 SPINK13Q1W4C9 94 aa11.14□□□□□ -0.63
RAB40C-202ENST00000509637 RNF182Q8N6D2 247 aa11.14□□□□□ -0.63
RAB40C-202ENST00000509637 SLC35E1Q96K37 410 aa11.14□□□□□ -0.63
RAB40C-202ENST00000509637 PRRT1Q99946 306 aa11.14□□□□□ -0.63
RAB40C-202ENST00000509637 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
RAB40C-202ENST00000509637 MAGT1Q9H0U3 335 aa11.14□□□□□ -0.63
RAB40C-202ENST00000509637 KCNIP3Q9Y2W7 256 aa11.14□□□□□ -0.63
RAB40C-202ENST00000509637 IL18Q14116 193 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 SPATA31B1PQ5VZV4 182 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 EBLN2Q6P2I7 272 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 BAP18Q8IXM2 172 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 DYNC2LI1Q8TCX1 351 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 DIRAS2Q96HU8 199 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 C16orf92Q96LL3 132 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 SLC25A22Q9H936 323 aa11.13□□□□□ -0.63
RAB40C-202ENST00000509637 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
RAB40C-202ENST00000509637 TEX48A0A1B0GUV7 120 aa11.12□□□□□ -0.63
RAB40C-202ENST00000509637 NUP62P37198 522 aaPredicted RBP11.12□□□□□ -0.63
RAB40C-202ENST00000509637 OR1S1Q8NH92 325 aa11.12□□□□□ -0.63
RAB40C-202ENST00000509637 KRTAP1-5Q9BYS1 174 aa11.12□□□□□ -0.63
RAB40C-202ENST00000509637 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
RAB40C-202ENST00000509637 RPRMQ9NS64 109 aa11.12□□□□□ -0.63
RAB40C-202ENST00000509637 LINC00588Q9Y4M8 146 aa11.12□□□□□ -0.63
RAB40C-202ENST00000509637 NBDYA0A0U1RRE5 68 aa11.11□□□□□ -0.63
RAB40C-202ENST00000509637 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
RAB40C-202ENST00000509637 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
RAB40C-202ENST00000509637 PPP1R14BQ96C90 147 aa11.11□□□□□ -0.63
RAB40C-202ENST00000509637 C16orf90A8MZG2 172 aa11.1□□□□□ -0.63
RAB40C-202ENST00000509637 ORM2P19652 201 aa11.1□□□□□ -0.63
RAB40C-202ENST00000509637 ATP5IP56385 69 aaPredicted RBP11.1□□□□□ -0.63
RAB40C-202ENST00000509637 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
RAB40C-202ENST00000509637 WRBO00258 174 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 CCNKO75909 580 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 TNFSF8P32971 234 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 C15orf53Q8NAA6 179 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 MCUBQ9NWR8 336 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 CACFD1Q9UGQ2 172 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 SCP2D1Q9UJQ7 156 aa11.09□□□□□ -0.63
RAB40C-202ENST00000509637 PAIP2BQ9ULR5 123 aaKnown RBP11.09□□□□□ -0.63
RAB40C-202ENST00000509637 PMS2P5A8MQ11 134 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 LYRM9A8MSI8 78 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 F5H768 121 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms