RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 P01737 135 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 GNG5P63218 68 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 CCL8P80075 99 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 Q6AWC8 147 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 LYPD2Q6UXB3 125 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 MS4A6AQ9H2W1 248 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 TPSG1Q9NRR2 321 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 Q9UFV3 132 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 LIPFP07098 398 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 IGLL1P15814 213 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 HIGD1AQ9Y241 93 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 KNTC1P50748 2209 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 ZNF785A8K8V0 405 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 SYS1-DBNDD2H3BUS1 97 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 K7EP13 123 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 MRPS12O15235 138 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 BSPH1Q075Z2 132 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 RUSC1-AS1Q66K80 236 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 ZNF493Q6ZR52 646 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 RITA1Q96K30 269 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 COX11Q9Y6N1 276 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 FRYLO94915 3013 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 DMDP11532 3685 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 SERTM2A0A1B0GWG4 89 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 K7EM74 188 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 OR1B1Q8NGR6 318 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 GPR179Q6PRD1 2367 aa7.34□□□□□ -1.23
PDGFRA-208ENST00000509490 FBLL1A6NHQ2 334 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 SHISA9B4DS77 424 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 H3BRN7 92 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 NTF3P20783 257 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 PPP1R27Q86WC6 154 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 CBY1Q9Y3M2 126 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 U3KQK5 164 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 IGHV1-3A0A0C4DH29 117 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 BUB1B-PAK6H3BSN5 160 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 PDE6HQ13956 83 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 LCN12Q6JVE5 192 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 TCF24Q7RTU0 167 aa7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 SLC25A39Q9BZJ4 359 aaPredicted RBP7.33□□□□□ -1.24
PDGFRA-208ENST00000509490 TRBV19A0A075B6N1 114 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 SIAH2O43255 324 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 ORM2P19652 201 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 UBE2V1Q13404 147 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 LINC01545Q5VT33 79 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 RNASEKQ6P5S7 137 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 LY6G5BQ8NDX9 201 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 SCNM1Q9BWG6 230 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 NGBQ9NPG2 151 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 RALYQ9UKM9 306 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 WI2-2373I1.2A0A1W2PRP0 233 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 FAM87AP0C7U9 286 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 RHOGP84095 191 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 KLK9Q2XQG4 91 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 IGFBPL1Q8WX77 278 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 PMCHL2Q9BQD1 86 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 HSPB8Q9UJY1 196 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 KLK9Q9UKQ9 250 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 PRRG2O14669 202 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 IGKV1-17P01599 117 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 PSG1P11464 419 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 GPR6P46095 362 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 SRSF2Q01130 221 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 SIGLEC15Q6ZMC9 328 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 S100A7AQ86SG5 101 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 ZNF738Q8NE65 137 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 H1FXQ92522 213 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 DAZAP1Q96EP5 407 aaKnown RBP7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 SCRT2Q9NQ03 307 aa7.32□□□□□ -1.24
PDGFRA-208ENST00000509490 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 IGHV2-70DA0A0C4DH43 119 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 OR4C46A6NHA9 309 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 CAMPP49913 170 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 RIGQ13278 110 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 SAPCD1Q5SSQ6 148 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 PRR27Q6MZM9 219 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 KIR3DL3Q8N743 410 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 NPBQ8NG41 125 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 NEU4Q8WWR8 484 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 SH2D7A6NKC9 451 aaPredicted RBP7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 E7EQL1 145 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 K7EIM0 57 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 NDUFA3O95167 84 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 LEPROTL1O95214 131 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 TFPI2P48307 235 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 Q56UQ5 140 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 WFDC8Q8IUA0 241 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 PRSS33Q8NF86 280 aa7.31□□□□□ -1.24
PDGFRA-208ENST00000509490 A0A1B0GUT8 65 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 APOBEC3AP31941 199 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 HCP5Q6MZN7 132 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 BLNKQ8WV28 456 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 SRSF12Q8WXF0 261 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 PGLYRP4Q96LB8 373 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 RAB1BQ9H0U4 201 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms