RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 C12orf45Q8N5I9 185 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 ENKURQ8TC29 256 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 MARC2Q969Z3 335 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 FAM110AQ9BQ89 295 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 MAP6D1Q9H9H5 199 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 U3KQ87 197 aa5.33□□□□□ -1.56
TOPBP1-207ENST00000509162 INMT-MINDY4F8WBC2 141 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 SOCS3O14543 225 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 GOSR2O14653 212 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 DFFBO76075 338 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 YIF1AO95070 293 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 IL4P05112 153 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 METTL15P1P0C7V9 234 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 SLC25A4P12235 298 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 TFPI2P48307 235 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 SUB1P53999 127 aaKnown RBP eCLIP5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 DEFB1P60022 68 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 YPEL3P61236 119 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 VAMP2P63027 116 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 OR2F1Q13607 317 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 TATDN3Q17R31 274 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 TCF24Q7RTU0 167 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 OR51G1Q8NGK1 321 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 DCANP1Q8TF63 244 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 SMIM8Q96KF7 97 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 SPAG8Q99932 426 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 HIPK2Q9H2X6 1198 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 SRD5A3Q9H8P0 318 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 PALMDQ9NP74 551 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 OR5AC2Q9NZP5 309 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 ALG5Q9Y673 324 aa5.32□□□□□ -1.56
TOPBP1-207ENST00000509162 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 IGKV3-7A0A075B6H7 116 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 TRAV14DV4A0A0A6YYC5 116 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 TRAV25A0A0B4J276 109 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 RPS10-NUDT3A0A1W2PQS6 291 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 FAM24AA6NFZ4 105 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 G3V3Q6 166 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 TSC22D2O75157 780 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 IFNA4P05014 189 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 CXCL3P19876 107 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 GPX4P36969 197 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 P2RY1P47900 373 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 RRAS2P62070 204 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 EWSR1Q01844 656 aaKnown RBP eCLIP5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 SLC38A11Q08AI6 406 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 MORN5Q5VZ52 161 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 OR8G2PQ6IF36 304 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 C16orf54Q6UWD8 224 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 APRG1Q8IVJ8 170 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 GBGT1Q8N5D6 347 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 SLC35E1Q96K37 410 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 TRGV9Q99603 122 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 MGST2Q99735 147 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 MS4A6AQ9H2W1 248 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 EDA2RQ9HAV5 297 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 GAR1Q9NY12 217 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 PSENENQ9NZ42 101 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 GSKIPQ9P0R6 139 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 LSM5Q9Y4Y9 91 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 KMT2AQ03164 3969 aa5.31□□□□□ -1.56
TOPBP1-207ENST00000509162 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 SNRPGP15A8MWD9 76 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 FAM25EA8MYX2 175 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 OR11H12B2RN74 326 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 K7EQG2 157 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 MRPS12O15235 138 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 BUB3O43684 328 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 MED6O75586 246 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 IFNA21P01568 189 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 HNRNPCP07910 306 aaKnown RBP eCLIP5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 GIG44P09565 113 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 C4BPBP20851 252 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 DLK1P80370 383 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 VWC2Q2TAL6 325 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 PATE2Q6UY27 113 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 OR11H7Q8NGC8 314 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 C2orf50Q96LR7 162 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 RCHY1Q96PM5 261 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 CIB3Q96Q77 187 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 SCRT1Q9BWW7 348 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 SLC25A32Q9H2D1 315 aa5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 PAIP2BQ9ULR5 123 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 STRAPQ9Y3F4 350 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-207ENST00000509162 AGRNO00468 2067 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 TRAV30A0A087WSZ9 112 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 ZFP92A6NM28 416 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 H3BRN7 92 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 DEDDO75618 318 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 CST7O76096 145 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 PTTG1O95997 202 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 RD3LP0DJH9 198 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 PRB4P10163 310 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 GCSHP23434 173 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 TAS2R30P59541 319 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 S100A10P60903 97 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 LYZP61626 148 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms