RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 RCVRNP35243 200 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 AKR1C2P52895 323 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 GDF5OSQ5U4N7 250 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 FAM222AQ5U5X8 452 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 MORN5Q5VZ52 161 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 SIGLEC15Q6ZMC9 328 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 ZNF709Q8N972 641 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 TMEM170AQ8WVE7 144 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 ENY2Q9NPA8 101 aa6.07□□□□□ -1.44
COL4A3BP-206ENST00000508809 VPS13BQ7Z7G8 4022 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 SMIM31A0A1B0GVY4 71 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 GSTZ1O43708 216 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 B3GALNT1O75752 331 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 CDS2O95674 445 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 TOMM40O96008 361 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 IL4P05112 153 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 RD3LP0DJH9 198 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 PGAM2P15259 253 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 RND2P52198 227 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 EMP1P54849 157 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 NEDD8Q15843 81 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 SP6Q3SY56 376 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 FOXI2Q6ZQN5 318 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 FAM219AQ8IW50 185 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 C1orf158Q8N1D5 194 aa6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 RRNAD1Q96FB5 475 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 SAV1Q9H4B6 383 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-206ENST00000508809 C16orf90A8MZG2 172 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 SOCS3O14543 225 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 PSG1P11464 419 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 PAX9P55771 341 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 DEFB1P60022 68 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 ZNF79Q15937 498 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 SPATA31B1PQ5VZV4 182 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 ETFRF1Q6IPR1 90 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 TMEM88Q6PEY1 159 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 SNX29P2Q8IUI4 249 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 ARRDC1Q8N5I2 433 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 C15orf53Q8NAA6 179 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 TERB2Q8NHR7 220 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 ZFAND1Q8TCF1 268 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 GLYATL2Q8WU03 294 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 NPIPB3Q92617 1050 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 RPL36ALQ969Q0 106 aaKnown RBP6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 YIPF6Q96EC8 236 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 Q9H521 79 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 COPZ2Q9P299 210 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 KLK11Q9UBX7 282 aa6.05□□□□□ -1.44
COL4A3BP-206ENST00000508809 IGHV3OR16-12A0A075B7B8 117 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 A8MTW9 85 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 IGKV3-20P01619 116 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 CD3DP04234 171 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 ELK1P19419 428 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 PSMB3P49720 205 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 FXYD7P58549 80 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 TIRAPP58753 221 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 PSG9Q00887 426 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 TRIM16LQ309B1 348 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 NOXA1Q86UR1 476 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 MAPKAPK5-AS1Q8N8E1 139 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 CCDC71LQ8N9Z2 235 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 SLC24A4Q8NFF2 622 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 OR51G1Q8NGK1 321 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 ZNRF2Q8NHG8 242 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 LHFPL5Q8TAF8 219 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 ABHD1Q96SE0 405 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 TMEM222Q9H0R3 208 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 SLC35B3Q9H1N7 401 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 HEYLQ9NQ87 328 aaPredicted RBP6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 COMMD3Q9UBI1 195 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 MTFP1Q9UDX5 166 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 GOLT1BQ9Y3E0 138 aa6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 YTHDF2Q9Y5A9 579 aaKnown RBP6.04□□□□□ -1.44
COL4A3BP-206ENST00000508809 TEX13DA0A0J9YY54 714 aaPredicted RBP6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 NBDYA0A0U1RRE5 68 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 HBE1P02100 147 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 HTN3P15516 51 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 TBPP20226 339 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 NUP62P37198 522 aaPredicted RBP6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 ID1P41134 155 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 ALDH3B2P48448 385 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 RORCP51449 518 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 LSM3P62310 102 aaKnown RBP6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 RRN3P1Q2M238 152 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 RNASE10Q5GAN6 216 aaKnown RBP6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 NMSQ5H8A3 153 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 C1orf194Q5T5A4 169 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 OR8G2PQ6IF36 304 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 SELENOHQ8IZQ5 122 aaKnown RBP6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 OR13C8Q8NGS7 320 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 GPR146Q96CH1 333 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 RNF125Q96EQ8 232 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 LINC00052Q96N35 136 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 RTBDNQ9BSG5 229 aaPredicted RBP6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 MGAT4CQ9UBM8 478 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 CACNG5Q9UF02 275 aa6.03□□□□□ -1.44
COL4A3BP-206ENST00000508809 CACFD1Q9UGQ2 172 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms