RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 A8MWP6 167 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 CXorf1O96002 111 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 IFNA1P01562 189 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 IGHV3-23P01764 117 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 H2AFB1P0C5Y9 115 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 CD28P10747 220 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 FAM78BQ5VT40 261 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 TOMM20LQ6UXN7 152 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 C12orf54Q6X4T0 127 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 OR11H1Q8NG94 326 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 CITED2Q99967 270 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 TMEM167BQ9NRX6 74 aa11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
HMGCLL1-208ENST00000508459 ZNF320A2RRD8 509 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 HELTA6NFD8 242 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 CCL24O00175 119 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 C8orf88P0DMB2 117 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 PSMB3P49720 205 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 RIPPLY3P57055 190 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 GUK1Q16774 197 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 C10orf99Q6UWK7 81 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 BPIFA4PQ86YQ2 179 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 FAM213BQ8TBF2 198 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 SUN5Q8TC36 379 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 ZNF747Q9BV97 191 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 NKX6-2Q9C056 277 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 S4R3C0 116 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 JMJD1CQ15652 2540 aa11.1□□□□□ -0.63
HMGCLL1-208ENST00000508459 PPP5D1E7EU14 171 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 CRYBB3P26998 211 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 GALR1P47211 349 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 FHL3Q13643 280 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 MBD3L1Q8WWY6 194 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 CITED1Q99966 193 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 TXNDC17Q9BRA2 123 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 C20orf24Q9BUV8 137 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 GPR61Q9BZJ8 451 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 ZFHX3Q15911 3703 aa11.09□□□□□ -0.63
HMGCLL1-208ENST00000508459 PF4P02776 101 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 KRTAP24-1Q3LI83 254 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 RPP25LQ8N5L8 163 aaKnown RBP11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 OR5B12Q96R08 314 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 ZFAND3Q9H8U3 227 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 TMEM14CQ9P0S9 112 aa11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 TEP1Q99973 2627 aaKnown RBP11.08□□□□□ -0.64
HMGCLL1-208ENST00000508459 MAP1LC3B2A6NCE7 125 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 STAG3L2P0CL84 134 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 DEFA5Q01523 94 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 NDUFA5Q16718 116 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 SFT2D1Q8WV19 159 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 TMEM37Q8WXS4 190 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 MCRIP2Q9BUT9 160 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 MAP1LC3BQ9GZQ8 125 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 SIGLEC8Q9NYZ4 499 aa11.07□□□□□ -0.64
HMGCLL1-208ENST00000508459 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 A0A087WW49 117 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 ZNF98A6NK75 572 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 H3BRN7 92 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 OR7C2O60412 319 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 GATA2P23769 480 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 PDE6HQ13956 83 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 FAM74A1Q5RGS3 127 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 IL34Q6ZMJ4 242 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 C8orf86Q6ZUL3 223 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 OR9G4Q8NGQ1 327 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 DOK5Q9P104 306 aa11.06□□□□□ -0.64
HMGCLL1-208ENST00000508459 IGHV7-4-1A0A0J9YVY3 117 aa11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 NDUFS6O75380 124 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 ATF4P18848 351 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 INSL3P51460 131 aa11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 PAFAH1B2P68402 229 aa11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 PRIMA1Q86XR5 153 aa11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 OR51M1Q9H341 326 aa11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 SLC25A22Q9H936 323 aa11.05□□□□□ -0.64
HMGCLL1-208ENST00000508459 ZMAT5Q9UDW3 170 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms