RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 BAALC-AS2P0C853 105 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 OGNP20774 298 aaKnown RBP1.32□□□□□ -2.2
SMN1-206ENST00000507905 DYNLT3P51808 116 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 CDK5R1Q15078 307 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 DEFB113Q30KQ7 82 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 RPS19BP1Q86WX3 136 aaKnown RBP1.32□□□□□ -2.2
SMN1-206ENST00000507905 MED12LQ86YW9 2145 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 Q8N2B8 174 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 CANT1Q8WVQ1 401 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 MALSU1Q96EH3 234 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 YPEL2Q96QA6 119 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 GPX7Q96SL4 187 aaPredicted RBP1.32□□□□□ -2.2
SMN1-206ENST00000507905 SLC25A21Q9BQT8 299 aaPredicted RBP1.32□□□□□ -2.2
SMN1-206ENST00000507905 ADAT1Q9BUB4 502 aaKnown RBP1.32□□□□□ -2.2
SMN1-206ENST00000507905 NPCDR1Q9BY65 106 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 C6orf62Q9GZU0 229 aaPredicted RBP1.32□□□□□ -2.2
SMN1-206ENST00000507905 MRPL40Q9NQ50 206 aaKnown RBP1.32□□□□□ -2.2
SMN1-206ENST00000507905 MED11Q9P086 117 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 SYNMO15061 1565 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 ANAPC1Q9H1A4 1944 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 PBRM1Q86U86 1689 aa1.32□□□□□ -2.2
SMN1-206ENST00000507905 MYOFQ9NZM1 2061 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 SDK1Q7Z5N4 2213 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 MAP1LC3B2A6NCE7 125 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 F8W036 122 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 GGCTO75223 188 aaKnown RBP1.31□□□□□ -2.2
SMN1-206ENST00000507905 TRGC2P03986 189 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 BRS3P32247 399 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 TMBIM6P55061 237 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 SURF2Q15527 256 aaPredicted RBP1.31□□□□□ -2.2
SMN1-206ENST00000507905 MSMO1Q15800 293 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 EIF5AL1Q6IS14 154 aaKnown RBP1.31□□□□□ -2.2
SMN1-206ENST00000507905 DCUN1D2Q6PH85 259 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 LINC00301Q8NCQ3 95 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 CARD19Q96LW7 228 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 NAA38Q9BRA0 125 aaKnown RBP1.31□□□□□ -2.2
SMN1-206ENST00000507905 TMEM70Q9BUB7 260 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 REG4Q9BYZ8 158 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 MAP1LC3BQ9GZQ8 125 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 OR5AC2Q9NZP5 309 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 CR1P17927 2039 aa1.31□□□□□ -2.2
SMN1-206ENST00000507905 A0A1B0GV72 72 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 H0YJX3 145 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 OR1I1O60431 355 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 RNASE3P12724 160 aaKnown RBP1.3□□□□□ -2.2
SMN1-206ENST00000507905 ARPP19P56211 112 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 C10orf55Q5SWW7 151 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 FKBP1CQ5VVH2 108 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 CLECL1Q8IZS7 167 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 OR10K1Q8NGX5 313 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 PPTC7Q8NI37 304 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 PLEKHB2Q96CS7 222 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 ZC2HC1AQ96GY0 325 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 POPDC3Q9HBV1 291 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 SMPXQ9UHP9 88 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 OR52A1Q9UKL2 312 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 HS3ST2Q9Y278 367 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 UHRF1BP1Q6BDS2 1440 aa1.3□□□□□ -2.2
SMN1-206ENST00000507905 TAF1LQ8IZX4 1826 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 SBF1O95248 1867 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 TRAV12-1A0A0B4J245 112 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 B4DSR2 109 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 K7ERJ3 54 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 PROSCO94903 275 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 IFNA21P01568 189 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 IFNA14P01570 189 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 HLA-EP13747 358 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 MYL5Q02045 173 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 PDE6HQ13956 83 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 SMIM15Q7Z3B0 74 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 IFT20Q8IY31 132 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 OR2T35Q8NGX2 323 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 OR4K15Q8NH41 348 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 SFT2D1Q8WV19 159 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 TEX37Q96LM6 180 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 CENPHQ9H3R5 247 aa1.29□□□□□ -2.2
SMN1-206ENST00000507905 TLCD2A6NGC4 264 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 A8MWV9 139 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 RAB4BP61018 213 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 DR1Q01658 176 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 RTL8BQ17RB0 113 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 TMEM78Q5T7P6 136 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 NUP35Q8NFH5 326 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 GRPEL2Q8TAA5 225 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 ZNF714Q96N38 554 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 RTL8AQ9BWD3 113 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 C14orf132Q9NPU4 83 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 RNF11Q9Y3C5 154 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 ASB4Q9Y574 426 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 CEP164Q9UPV0 1460 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 COL4A1P02462 1669 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 COL4A5P29400 1685 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 NUP210LQ5VU65 1888 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 MYO5AQ9Y4I1 1855 aaKnown RBP1.28□□□□□ -2.2
SMN1-206ENST00000507905 MYH10P35580 1976 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 EML6Q6ZMW3 1958 aa1.28□□□□□ -2.2
SMN1-206ENST00000507905 YTHDC2Q9H6S0 1430 aaKnown RBP1.27□□□□□ -2.21
SMN1-206ENST00000507905 A0A1W2PRE2 83 aa1.27□□□□□ -2.21
SMN1-206ENST00000507905 MRPS14O60783 128 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms