RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 Q6AWC8 147 aa14.2□□□□□ -0.14
NUP54-205ENST00000507257 FAM216BQ8N7L0 139 aa14.2□□□□□ -0.14
NUP54-205ENST00000507257 TMEM186Q96B77 213 aa14.2□□□□□ -0.14
NUP54-205ENST00000507257 ZNRD1Q9P1U0 126 aa14.2□□□□□ -0.14
NUP54-205ENST00000507257 A0A1W2PPI3 338 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 A6NDN8 102 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 IGLV2-11P01706 119 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 TNFAIP6P98066 277 aaPredicted RBP14.19□□□□□ -0.14
NUP54-205ENST00000507257 RPRMLQ8N4K4 120 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 LGALS9BQ3B8N2 356 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 VMA21Q3ZAQ7 101 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 LGALS9CQ6DKI2 356 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 TEX45Q8NA69 505 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 RPH3ALQ9UNE2 315 aa14.19□□□□□ -0.14
NUP54-205ENST00000507257 FRYQ5TBA9 3013 aa14.18□□□□□ -0.14
NUP54-205ENST00000507257 ZNF138P52744 262 aa14.18□□□□□ -0.14
NUP54-205ENST00000507257 C10orf55Q5SWW7 151 aa14.18□□□□□ -0.14
NUP54-205ENST00000507257 FER1L6-AS1Q8NA97 138 aa14.18□□□□□ -0.14
NUP54-205ENST00000507257 OR9G4Q8NGQ1 327 aa14.18□□□□□ -0.14
NUP54-205ENST00000507257 INTS1Q8N201 2190 aaKnown RBP14.18□□□□□ -0.14
NUP54-205ENST00000507257 IGHV1-46P01743 117 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 ZNF493Q6ZR52 646 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 FA2HQ7L5A8 372 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 BOD1L2Q8IYS8 172 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 M0R1B8 84 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 MC5RP33032 325 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 LGALS7P47929 136 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 HSD52Q0P140 79 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 MRGPRG-AS1Q2M3A8 158 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 IGFL2Q6UWQ7 119 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 TMEM75Q8N9X5 138 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 DEFB108BQ8NET1 73 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 MEGF9Q9H1U4 602 aa14.17□□□□□ -0.14
NUP54-205ENST00000507257 MBD3L4A6NDZ8 208 aaPredicted RBP14.16□□□□□ -0.14
NUP54-205ENST00000507257 MBD3L3A6NE82 208 aaPredicted RBP14.16□□□□□ -0.14
NUP54-205ENST00000507257 MBD3L5A6NJ08 208 aaPredicted RBP14.16□□□□□ -0.14
NUP54-205ENST00000507257 K7EP34 96 aa14.16□□□□□ -0.14
NUP54-205ENST00000507257 PRR31Q5SQ13 230 aa14.16□□□□□ -0.14
NUP54-205ENST00000507257 MBD3L2Q8NHZ7 208 aaPredicted RBP14.16□□□□□ -0.14
NUP54-205ENST00000507257 HIGD1AQ9Y241 93 aa14.16□□□□□ -0.14
NUP54-205ENST00000507257 G3V4G9 280 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 APOBEC3AP31941 199 aaPredicted RBP14.15□□□□□ -0.14
NUP54-205ENST00000507257 ATP1A1-AS1Q5TC04 95 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 C1orf210Q8IVY1 113 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 CIARTQ8N365 385 aaPredicted RBP14.15□□□□□ -0.14
NUP54-205ENST00000507257 AP1S3Q96PC3 154 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 NPFFR1Q9GZQ6 430 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 U3KQK5 164 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 NAV3Q8IVL0 2385 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 ZNF785A8K8V0 405 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 PSMG4Q5JS54 123 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 OR4X2Q8NGF9 303 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 PRSS3P2Q8NHM4 247 aa14.15□□□□□ -0.14
NUP54-205ENST00000507257 MCRIP2Q9BUT9 160 aaKnown RBP14.15□□□□□ -0.14
NUP54-205ENST00000507257 PPIAL4DF5H284 164 aa14.14□□□□□ -0.15
NUP54-205ENST00000507257 ARMS2P0C7Q2 107 aa14.14□□□□□ -0.15
NUP54-205ENST00000507257 NEGR1Q7Z3B1 354 aa14.14□□□□□ -0.15
NUP54-205ENST00000507257 OR5A1Q8NGJ0 315 aa14.14□□□□□ -0.15
NUP54-205ENST00000507257 COL25A1Q9BXS0 654 aaPredicted RBP14.14□□□□□ -0.15
NUP54-205ENST00000507257 RABAC1Q9UI14 185 aa14.14□□□□□ -0.15
NUP54-205ENST00000507257 A0A096LNJ9 63 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 NCR2O95944 276 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 CSN3P07498 182 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 LYPD1Q8N2G4 141 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 TRAV17A0A0B4J275 112 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 TMEM238C9JI98 176 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 H0Y8G0 127 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 SMAD7O15105 426 aaKnown RBP14.13□□□□□ -0.15
NUP54-205ENST00000507257 RUSC1-AS1Q66K80 236 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 VHLLQ6RSH7 139 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 PRNTQ86SH4 94 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 PIFOQ8TCI5 191 aa14.13□□□□□ -0.15
NUP54-205ENST00000507257 SRSF12Q8WXF0 261 aaKnown RBP14.13□□□□□ -0.15
NUP54-205ENST00000507257 TRAV8-1A0A0A6YYK1 113 aa14.12□□□□□ -0.15
NUP54-205ENST00000507257 C19orf67A6NJJ6 358 aa14.12□□□□□ -0.15
NUP54-205ENST00000507257 SLC25A17O43808 307 aa14.12□□□□□ -0.15
NUP54-205ENST00000507257 FOXE3Q13461 319 aa14.12□□□□□ -0.15
NUP54-205ENST00000507257 GOLT1AQ6ZVE7 132 aa14.12□□□□□ -0.15
NUP54-205ENST00000507257 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
NUP54-205ENST00000507257 ZC2HC1AQ96GY0 325 aa14.12□□□□□ -0.15
NUP54-205ENST00000507257 A1L4Q6 167 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 THBDP07204 575 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 SMIM17P0DL12 118 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 TMEM200BQ69YZ2 307 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 SEM1Q6ZVN7 128 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 JMJD8Q96S16 334 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 SLC25A39Q9BZJ4 359 aaPredicted RBP14.11□□□□□ -0.15
NUP54-205ENST00000507257 K7EQM0 130 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 SAP30O75446 220 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 CT45A10P0DMU9 189 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 CD59P13987 128 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 CCL3L1P16619 93 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 RPL27AP46776 148 aaKnown RBP14.11□□□□□ -0.15
NUP54-205ENST00000507257 ADAMTSL5Q6ZMM2 481 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 ZADH2Q8N4Q0 377 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 OR2K2Q8NGT1 345 aa14.11□□□□□ -0.15
NUP54-205ENST00000507257 A0A0G2JLM5 398 aa14.1□□□□□ -0.15
NUP54-205ENST00000507257 CRYGBP07316 175 aa14.1□□□□□ -0.15
NUP54-205ENST00000507257 TNFRSF1AP19438 455 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms