RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 RCL1Q9Y2P8 373 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-215ENST00000506161 CCSO14618 274 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 SSSCA1O60232 199 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 DEDDO75618 318 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 IGKV3-20P01619 116 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 TMEM217Q8N7C4 229 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 SCRT1Q9BWW7 348 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 PSENENQ9NZ42 101 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
PDLIM7-215ENST00000506161 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 PRB4P10163 310 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 C4orf46Q504U0 113 aa12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 ZNF767PQ75MW2 155 aa12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 ZNF709Q8N972 641 aa12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 LINC00052Q96N35 136 aa12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 C20orf85Q9H1P6 137 aa12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 SEPSECSQ9HD40 501 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 STRAPQ9Y3F4 350 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-215ENST00000506161 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 METTL15P1P0C7V9 234 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 RRAS2P62070 204 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 PRR20EP86478 221 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 PRR20CP86479 221 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 PRR20DP86480 221 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 PRR20BP86481 221 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 PRR20AP86496 221 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 IGFL4Q6B9Z1 124 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 TMEM14EPQ6UXP3 125 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 ZBTB8BQ8NAP8 495 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 SEC22CQ9BRL7 303 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 SAV1Q9H4B6 383 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 DOK5Q9P104 306 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 TBC1D24Q9ULP9 559 aa12.05□□□□□ -0.48
PDLIM7-215ENST00000506161 RYR1P21817 5038 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 ZNF98A6NK75 572 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 LYRM1O43325 122 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 ORM2P19652 201 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 HLA-DMBP28068 263 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 SNRPD3P62318 126 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 Q6ZTC4 211 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 TMEM144Q7Z5S9 345 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 SMIM8Q96KF7 97 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 C7orf50Q9BRJ6 194 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 SLC35B3Q9H1N7 401 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 SLC25A22Q9H936 323 aa12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-215ENST00000506161 TRAV6A0A075B6T7 132 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 H3BRN7 92 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 MBPP02686 304 aaPredicted RBP12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 MIFP14174 115 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 PSMB3P49720 205 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 CYP2G1PQ6ZSU1 146 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 OR8I2Q8N0Y5 310 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 OR1B1Q8NGR6 318 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 PPP1R14BQ96C90 147 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 C11orf1Q9H5F2 150 aa12.03□□□□□ -0.48
PDLIM7-215ENST00000506161 VPS13DQ5THJ4 4388 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 SMCO3A2RU48 225 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 TCRBP04435 133 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 TMEM41BQ5BJD5 291 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 PATE2Q6UY27 113 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 ZNF705AQ6ZN79 300 aaPredicted RBP12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 RSG1Q9BU20 258 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
PDLIM7-215ENST00000506161 A0A0J9YX75 114 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 C7orf66A4D0T2 115 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 FABP1P07148 127 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 NUP62P37198 522 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 C12orf74Q32Q52 190 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 FAM78BQ5VT40 261 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 FOXI2Q6ZQN5 318 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 BPIFCQ8NFQ6 507 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 SLC25A39Q9BZJ4 359 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 HRH4Q9H3N8 390 aa12.01□□□□□ -0.49
PDLIM7-215ENST00000506161 CENPXA8MT69 81 aa12□□□□□ -0.49
PDLIM7-215ENST00000506161 ZNF705FA8MVS1 300 aaPredicted RBP12□□□□□ -0.49
PDLIM7-215ENST00000506161 IFNA21P01568 189 aa12□□□□□ -0.49
PDLIM7-215ENST00000506161 ZNF705DP0CH99 300 aaPredicted RBP12□□□□□ -0.49
PDLIM7-215ENST00000506161 ZNF705BP0CI00 300 aaPredicted RBP12□□□□□ -0.49
PDLIM7-215ENST00000506161 DLK1P80370 383 aa12□□□□□ -0.49
PDLIM7-215ENST00000506161 SLC38A11Q08AI6 406 aa12□□□□□ -0.49
PDLIM7-215ENST00000506161 AMTNQ6UX39 209 aa12□□□□□ -0.49
PDLIM7-215ENST00000506161 C1orf158Q8N1D5 194 aa12□□□□□ -0.49
PDLIM7-215ENST00000506161 RNF182Q8N6D2 247 aa12□□□□□ -0.49
PDLIM7-215ENST00000506161 OR4B1Q8NGF8 309 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms