RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 S100A7AQ86SG5 101 aa15.03■□□□□ -0
SQSTM1-210ENST00000506042 C16orf92Q96LL3 132 aa15.03■□□□□ -0
SQSTM1-210ENST00000506042 GPR82Q96P67 336 aa15.03■□□□□ -0
SQSTM1-210ENST00000506042 IGLV2-18A0A075B6J9 118 aa15.02■□□□□ -0
SQSTM1-210ENST00000506042 RTL8CO15255 209 aa15.02■□□□□ -0
SQSTM1-210ENST00000506042 MED6O75586 246 aa15.02■□□□□ -0
SQSTM1-210ENST00000506042 FXYD7P58549 80 aa15.02■□□□□ -0
SQSTM1-210ENST00000506042 ZNF79Q15937 498 aa15.02■□□□□ -0
SQSTM1-210ENST00000506042 DUXBA0A1W2PPF3 345 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 CTDSPLO15194 276 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 DUSP14O95147 198 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 FAUP35544 74 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 FAAP20Q6NZ36 180 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 OR51S1Q8NGJ8 323 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 OR4C16Q8NGL9 310 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 CIB3Q96Q77 187 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 RBKSQ9H477 322 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 DOK5Q9P104 306 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 SLC45A2Q9UMX9 530 aa15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 YTHDF2Q9Y5A9 579 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-210ENST00000506042 GAMTQ14353 236 aa15□□□□□ -0.01
SQSTM1-210ENST00000506042 FAM78BQ5VT40 261 aa15□□□□□ -0.01
SQSTM1-210ENST00000506042 DIRAS2Q96HU8 199 aa15□□□□□ -0.01
SQSTM1-210ENST00000506042 TRGV9Q99603 122 aa15□□□□□ -0.01
SQSTM1-210ENST00000506042 MCUBQ9NWR8 336 aa15□□□□□ -0.01
SQSTM1-210ENST00000506042 RSL24D1Q9UHA3 163 aaKnown RBP15□□□□□ -0.01
SQSTM1-210ENST00000506042 PAIP2BQ9ULR5 123 aaKnown RBP15□□□□□ -0.01
SQSTM1-210ENST00000506042 CTF1Q16619 201 aa14.99□□□□□ -0.01
SQSTM1-210ENST00000506042 GDF5OSQ5U4N7 250 aa14.99□□□□□ -0.01
SQSTM1-210ENST00000506042 OR1B1Q8NGR6 318 aa14.99□□□□□ -0.01
SQSTM1-210ENST00000506042 TMEM170AQ8WVE7 144 aa14.99□□□□□ -0.01
SQSTM1-210ENST00000506042 IGF2BP2-AS1Q96M15 143 aa14.99□□□□□ -0.01
SQSTM1-210ENST00000506042 SLC35B3Q9H1N7 401 aa14.99□□□□□ -0.01
SQSTM1-210ENST00000506042 RNF24Q9Y225 148 aa14.99□□□□□ -0.01
SQSTM1-210ENST00000506042 HECTD4Q9Y4D8 3996 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 A0A0J9YX75 114 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 LYRM9A8MSI8 78 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 INSP01308 110 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 ZNF90Q03938 601 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 ZNF709Q8N972 641 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 BPIFCQ8NFQ6 507 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 OR4D5Q8NGN0 318 aa14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 WDR12Q9GZL7 423 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-210ENST00000506042 Q6ZR54 194 aa14.97□□□□□ -0.01
SQSTM1-210ENST00000506042 GPR141Q7Z602 305 aa14.97□□□□□ -0.01
SQSTM1-210ENST00000506042 TMEM147Q9BVK8 224 aa14.97□□□□□ -0.01
SQSTM1-210ENST00000506042 PPP1R14DQ9NXH3 145 aa14.97□□□□□ -0.01
SQSTM1-210ENST00000506042 AP3S2P59780 193 aa14.96□□□□□ -0.01
SQSTM1-210ENST00000506042 OR2F1Q13607 317 aa14.96□□□□□ -0.01
SQSTM1-210ENST00000506042 TMEM88Q6PEY1 159 aa14.96□□□□□ -0.01
SQSTM1-210ENST00000506042 SLC25A22Q9H936 323 aa14.96□□□□□ -0.01
SQSTM1-210ENST00000506042 HERC2O95714 4834 aa14.95□□□□□ -0.02
SQSTM1-210ENST00000506042 ANKRD20A5PA0PJZ0 165 aa14.95□□□□□ -0.02
SQSTM1-210ENST00000506042 SOCS3O14543 225 aa14.95□□□□□ -0.02
SQSTM1-210ENST00000506042 LYZL2Q7Z4W2 148 aa14.95□□□□□ -0.02
SQSTM1-210ENST00000506042 SCRT1Q9BWW7 348 aa14.95□□□□□ -0.02
SQSTM1-210ENST00000506042 NOL3O60936 208 aaKnown RBP14.94□□□□□ -0.02
SQSTM1-210ENST00000506042 SLC25A6P12236 298 aa14.94□□□□□ -0.02
SQSTM1-210ENST00000506042 CCL18P55774 89 aa14.94□□□□□ -0.02
SQSTM1-210ENST00000506042 AKR1C1Q04828 323 aa14.93□□□□□ -0.02
SQSTM1-210ENST00000506042 TMEM256Q8N2U0 113 aa14.93□□□□□ -0.02
SQSTM1-210ENST00000506042 RSG1Q9BU20 258 aa14.93□□□□□ -0.02
SQSTM1-210ENST00000506042 NAA50Q9GZZ1 169 aaKnown RBP14.93□□□□□ -0.02
SQSTM1-210ENST00000506042 MIXL1Q9H2W2 232 aa14.93□□□□□ -0.02
SQSTM1-210ENST00000506042 DNAH10Q8IVF4 4471 aa14.92□□□□□ -0.02
SQSTM1-210ENST00000506042 CTDSP2O14595 271 aa14.92□□□□□ -0.02
SQSTM1-210ENST00000506042 TSPOP30536 169 aa14.92□□□□□ -0.02
SQSTM1-210ENST00000506042 RAP2BP61225 183 aa14.92□□□□□ -0.02
SQSTM1-210ENST00000506042 TMEM128Q5BJH2 165 aa14.92□□□□□ -0.02
SQSTM1-210ENST00000506042 C1orf158Q8N1D5 194 aa14.92□□□□□ -0.02
SQSTM1-210ENST00000506042 THAP8Q8NA92 274 aa14.92□□□□□ -0.02
SQSTM1-210ENST00000506042 IGKV1D-37A0A075B6S9 117 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 ZNF98A6NK75 572 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 F6UB75 175 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 ATP5G1P05496 136 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 ORM2P19652 201 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 ATP5G3P48201 142 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 DEFB1P60022 68 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 LRRC20Q8TCA0 184 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 RAB2BQ8WUD1 216 aa14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 MRPS26Q9BYN8 205 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 CCDC59Q9P031 241 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-210ENST00000506042 ADAP1O75689 374 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 IAPPP10997 89 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 RPL7P18124 248 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 VAMP1P23763 118 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 CLINT1Q14677 625 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 TMED4Q7Z7H5 227 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 ZNF738Q8NE65 137 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 BCL7BQ9BQE9 202 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 SLC25A32Q9H2D1 315 aa14.9□□□□□ -0.02
SQSTM1-210ENST00000506042 A8MTW9 85 aa14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 C16orf90A8MZG2 172 aa14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 F5H768 121 aa14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 DEFB130BP0DP73 79 aa14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 DEFB130AP0DP74 79 aa14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 CNN1P51911 297 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 FGL1Q08830 312 aa14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 PRR13Q9NZ81 148 aa14.89□□□□□ -0.03
SQSTM1-210ENST00000506042 VPS13DQ5THJ4 4388 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms