RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 H7C1C5 153 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 AIPO00170 330 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 BANF1O75531 89 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 NDUFC2O95298 119 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 TCL1BO95988 128 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 COX6A1P12074 109 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 IDO1P14902 403 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 SERPINB1P30740 379 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 BRS3P32247 399 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 PHBP35232 272 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 TCTAP57738 103 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 LCN6P62502 163 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 DR1Q01658 176 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 TSNQ15631 228 aaKnown RBP0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 SNCBQ16143 134 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 KHDC3LQ587J8 217 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 AKR1C8PQ5T2L2 129 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 C3orf33Q6P1S2 294 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 Q6ZQT0 140 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 GRINAQ7Z429 371 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 EXOC3-AS1Q8N2X6 119 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 FAM19A2Q8N3H0 131 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 WFDC5Q8TCV5 224 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 ZHX1-C8orf76Q96EF9 292 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 ADAT3Q96EY9 351 aaPredicted RBP0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 LYSMD1Q96S90 227 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 IMUPQ9GZP8 106 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 SH3BGRL3Q9H299 93 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 CENPHQ9H3R5 247 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 BIN3Q9NQY0 253 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 ACER3Q9NUN7 267 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 SMPXQ9UHP9 88 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 SSR3Q9UNL2 185 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 SLC35A3Q9Y2D2 325 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 ZFHX4Q86UP3 3567 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 NUP210Q8TEM1 1887 aaPredicted RBP0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 TRPM1Q7Z4N2 1603 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 MYLKQ15746 1914 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 CD109Q6YHK3 1445 aa0.81□□□□□ -2.28
TOPBP1-204ENST00000505804 CAMSAP2Q08AD1 1489 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 MUC2Q02817 5179 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 ZNF462Q96JM2 2506 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 TEP1Q99973 2627 aaKnown RBP0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 MYH10P35580 1976 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 A0A087WX48 190 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 TRAV1-1A0A0B4J248 108 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 A0A0D9SG52 128 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 A0A1B0GV72 72 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 C2orf70A6NJV1 201 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 H0YJX3 145 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 GPR31O00270 319 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 ASAH2BP0C7U1 165 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 RNASE4P34096 147 aaKnown RBP0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 RRN3P1Q2M238 152 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 SMIM15Q7Z3B0 74 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 DEFB128Q7Z7B8 93 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 OR5A1Q8NGJ0 315 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 OR8D4Q8NGM9 314 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 SLAMF6Q96DU3 332 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 HIST1H2BLQ99880 126 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 PBDC1Q9BVG4 233 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 MIXL1Q9H2W2 232 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 OSTCQ9NRP0 149 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 EPDR1Q9UM22 224 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 HYDINQ4G0P3 5121 aa0.8□□□□□ -2.28
TOPBP1-204ENST00000505804 NAV2Q8IVL1 2488 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 LAMB4A4D0S4 1761 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 TRBV6-7A0A0A0MS04 114 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 RIIAD1A6NNX1 92 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 TMEM256-PLSCR3K7ERE1 68 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 TAX1BP3O14907 124 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 CST8O60676 142 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 GGCTO75223 188 aaKnown RBP0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 APOA2P02652 100 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 CSN2P05814 226 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 CRHP06850 196 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 GLRXP35754 106 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 SRP14P37108 136 aaKnown RBP0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 EIF5AP63241 154 aaKnown RBP0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 TFAMQ00059 246 aaKnown RBP0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 SCGB2B2Q4G0G5 96 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 TMEM78Q5T7P6 136 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 BCL2L15Q5TBC7 163 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 DPPA3Q6W0C5 159 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 STX19Q8N4C7 294 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 LINC00311Q8N616 119 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 OR4E2Q8NGC2 313 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 STAG3L4Q8TBR4 150 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 PLEKHB2Q96CS7 222 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 MALSU1Q96EH3 234 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 OBSCN-AS1Q96MR7 158 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 GPER1Q99527 375 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 MRPL57Q9BQC6 102 aaKnown RBP0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 TMEM70Q9BUB7 260 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 OR2J1Q9GZK6 312 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 PBOV1Q9GZY1 135 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 MRPL40Q9NQ50 206 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms