RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SMAD7O15105 426 aaKnown RBP6.3□□□□□ -1.4
COL4A5-208ENST00000505728 IGF1P05019 195 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 NPPCP23582 126 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 S100A7P31151 101 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 ATP5G3P48201 142 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 LYZP61626 148 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 LY6EQ16553 131 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 ZNF674Q2M3X9 581 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 DEFB112Q30KQ8 113 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 Q56UQ5 140 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.3□□□□□ -1.4
COL4A5-208ENST00000505728 NECAP1Q8NC96 275 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 OR5R1Q8NH85 324 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 TMEM190Q8WZ59 177 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 C11orf52Q96A22 123 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
COL4A5-208ENST00000505728 C20orf24Q9BUV8 137 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 TMEM14CQ9P0S9 112 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 ZNF580Q9UK33 172 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 RNF24Q9Y225 148 aa6.3□□□□□ -1.4
COL4A5-208ENST00000505728 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
COL4A5-208ENST00000505728 TRBV7-1A0A0A6YYK4 115 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 CXorf65A6NEN9 183 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 INAFM1C9JVW0 142 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 F8W735 103 aaPredicted RBP6.29□□□□□ -1.4
COL4A5-208ENST00000505728 G3V318 75 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 NUPL2O15504 423 aaKnown RBP6.29□□□□□ -1.4
COL4A5-208ENST00000505728 OR2C1O95371 312 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 OR10J4P0C629 311 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 IER3P46695 156 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 RPL23P62829 140 aaKnown RBP6.29□□□□□ -1.4
COL4A5-208ENST00000505728 UBE2L3P68036 154 aaKnown RBP6.29□□□□□ -1.4
COL4A5-208ENST00000505728 RHOGP84095 191 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 ATP5G2Q06055 141 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 C9orf152Q5JTZ5 239 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 MORN5Q5VZ52 161 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 TMEM88Q6PEY1 159 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 CBLN2Q8IUK8 224 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 C15orf54Q8N8G6 183 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 ZNF491Q8N8L2 437 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 MAPK1IP1LQ8NDC0 245 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 ZNF502Q8TBZ5 544 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 EEF1AKMT3Q96AZ1 226 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 FXYD5Q96DB9 178 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 RNF125Q96EQ8 232 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 TCEAL7Q9BRU2 100 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
COL4A5-208ENST00000505728 CTDSP1Q9GZU7 261 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 PRDM13Q9H4Q3 707 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 TMEM242Q9NWH2 141 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 LY96Q9Y6Y9 160 aa6.29□□□□□ -1.4
COL4A5-208ENST00000505728 SH2D7A6NKC9 451 aaPredicted RBP6.28□□□□□ -1.4
COL4A5-208ENST00000505728 FAM223BA6NKX1 122 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 H3BRN7 92 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 AP4M1O00189 453 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 TSPAN4O14817 238 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 NDUFB4O95168 129 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 MT-ND4LP03901 98 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 CTSGP08311 255 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 NBEAP1P0C6P0 100 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 HIST1H1EP10412 219 aaKnown RBP6.28□□□□□ -1.4
COL4A5-208ENST00000505728 SUMO1P63165 101 aaKnown RBP6.28□□□□□ -1.4
COL4A5-208ENST00000505728 KRTAP1-1Q07627 177 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 KIAA0141Q14154 515 aaPredicted RBP6.28□□□□□ -1.4
COL4A5-208ENST00000505728 C15orf32Q32M92 178 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 ZNF343Q6P1L6 599 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 Q6YL49 198 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 ZNF600Q6ZNG1 722 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 FAM223AQ8IWN6 122 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 BCL6BQ8N143 479 aaPredicted RBP6.28□□□□□ -1.4
COL4A5-208ENST00000505728 ANAPC16Q96DE5 110 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 SHANK2-AS3Q9BTD1 123 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 SVEP1Q4LDE5 3571 aa6.28□□□□□ -1.4
COL4A5-208ENST00000505728 NBEAL1Q6ZS30 2694 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 SCO2A0A1W2PP80 73 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 HELTA6NFD8 242 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 COLCA2A8K830 154 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 C9JCJ5 164 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 CLDN34H7C241 214 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 IL4P05112 153 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 PYYP10082 97 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 GP9P14770 177 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 CRYBB3P26998 211 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 PPIFP30405 207 aaKnown RBP6.27□□□□□ -1.41
COL4A5-208ENST00000505728 MYCNOSP40205 109 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 AKR1C3P42330 323 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 TAS2R60P59551 318 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 ADIRFQ15847 76 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 RNF212Q495C1 297 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 BPIFA4PQ86YQ2 179 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 USMG5Q96IX5 58 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 S4R3C0 116 aa6.27□□□□□ -1.41
COL4A5-208ENST00000505728 MDFIC2A0A1B0GVS7 189 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 TMEM89A2RUT3 159 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 OR2T8A6NH00 312 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 ZNF98A6NK75 572 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 GGTLC3B5MD39 225 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 PPP1R2P9O14990 202 aa6.26□□□□□ -1.41
COL4A5-208ENST00000505728 TGOLN2O43493 480 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms