RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 HMGN1P05114 100 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 PIRTP0C851 137 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 FGF6P10767 208 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 HLA-EP13747 358 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 CDK6Q00534 326 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 LGALS9BQ3B8N2 356 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 TMEM97Q5BJF2 176 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 CLLU1Q5K131 121 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 C12orf73Q69YU5 71 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 LGALS9CQ6DKI2 356 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 LRRC28Q86X40 367 aaPredicted RBP2.39□□□□□ -2.03
SMN2-204ENST00000503678 SNX29P2Q8IUI4 249 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 OR10D4PQ8NGN7 298 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 OR5H6Q8NGV6 325 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 OR11H2Q8NH07 326 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 SGMS2Q8NHU3 365 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 TEX47Q8TBZ9 253 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 ZNF431Q8TF32 576 aaPredicted RBP2.39□□□□□ -2.03
SMN2-204ENST00000503678 RNASE6Q93091 150 aaKnown RBP2.39□□□□□ -2.03
SMN2-204ENST00000503678 TVP23CQ96ET8 276 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 SFRP2Q96HF1 295 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 ERMAPQ96PL5 475 aaPredicted RBP2.39□□□□□ -2.03
SMN2-204ENST00000503678 LYSMD1Q96S90 227 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 EFCAB11Q9BUY7 163 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 CXCL16Q9H2A7 254 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 C16orf95Q9H693 158 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 CACYBPQ9HB71 228 aaKnown RBP2.39□□□□□ -2.03
SMN2-204ENST00000503678 TXNL4BQ9NX01 149 aaKnown RBP2.39□□□□□ -2.03
SMN2-204ENST00000503678 CALML5Q9NZT1 146 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 HSPB11Q9Y547 144 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 NUBP2Q9Y5Y2 271 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 V9GYH0 126 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 DSPPQ9NZW4 1301 aa2.39□□□□□ -2.03
SMN2-204ENST00000503678 SNRNP200O75643 2136 aaKnown RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 IGKV1D-17A0A075B6S4 117 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 A0A087WUU8 490 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 LOC105371267A0A1B0GV96 52 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 NAP1L6A6NFF2 107 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 I3L521 148 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 LST1O00453 97 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 SOD1P00441 154 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 IGHV1-69P01742 117 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 CD5P06127 495 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 HIST1H1TP22492 207 aaPredicted RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 RPL27AP46776 148 aaKnown RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 GABRA2P47869 451 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 EVX1P49640 407 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 POLR2GP62487 172 aaKnown RBP eCLIP2.38□□□□□ -2.03
SMN2-204ENST00000503678 GRK1Q15835 563 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 FAM229BQ4G0N7 80 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 NUP210LQ5VU65 1888 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 RPL13AP3Q6NVV1 102 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 RPS4Y2Q8TD47 263 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 GNPDA2Q8TDQ7 276 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 SKA2Q8WVK7 121 aaPredicted RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 NMNAT1Q9HAN9 279 aaPredicted RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 ACER3Q9NUN7 267 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 MED9Q9NWA0 146 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 MRPL16Q9NX20 251 aaKnown RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 MRPL27Q9P0M9 148 aaKnown RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 SCP2D1Q9UJQ7 156 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 BAIAP2Q9UQB8 552 aa2.38□□□□□ -2.03
SMN2-204ENST00000503678 LSM2Q9Y333 95 aaKnown RBP2.38□□□□□ -2.03
SMN2-204ENST00000503678 A0A087WUJ7 227 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 A0A0D9SEW6 157 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 A8MUN3 132 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 M0R233 179 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 PLA2G10O15496 165 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 SULT1B1O43704 296 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 TTRP02766 147 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 FAUP35544 74 aaKnown RBP2.37□□□□□ -2.03
SMN2-204ENST00000503678 CD200P41217 278 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 RBM11P57052 281 aaKnown RBP2.37□□□□□ -2.03
SMN2-204ENST00000503678 TAS2R30P59541 319 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 HIST1H3AP68431 136 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 MRPS10P82664 201 aaKnown RBP2.37□□□□□ -2.03
SMN2-204ENST00000503678 H3F3AP84243 136 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 AGTRAPQ6RW13 159 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 TEX261Q6UWH6 196 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 SPATA12Q7Z6I5 190 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 CLECL1Q8IZS7 167 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 OR6V1Q8N148 313 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 C9orf62Q8N4C0 152 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 TBC1D19Q8N5T2 526 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 CNEP1R1Q8N9A8 125 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 LINC00304Q8N9R0 145 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 OR2T4Q8NH00 348 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 BORCS7Q96B45 105 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 NIPSNAP1Q9BPW8 284 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 ULBP3Q9BZM4 244 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 PCBD2Q9H0N5 130 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 BCL2L10Q9HD36 194 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 C14orf105Q9NVL8 296 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 TVP23BQ9NYZ1 205 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 MED11Q9P086 117 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 ABRACLQ9P1F3 81 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 COMMD3Q9UBI1 195 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 ATPIF1Q9UII2 106 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 U3KQ87 197 aa2.37□□□□□ -2.03
SMN2-204ENST00000503678 MEIKINA0A087WXM9 373 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms