RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 NF1P21359 2839 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 IGHV3OR16-8A0A075B7F1 116 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 ELOA3CA0A087WX78 387 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 A0A1W2PPV4 95 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 TMEM89A2RUT3 159 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 H3BRN7 92 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 BMPR1BO00238 502 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 MRPS12O15235 138 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 TGOLN2O43493 480 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 HYPMO75409 117 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 CXorf1O96002 111 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 IL4P05112 153 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 SRP19P09132 144 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 C8orf88P0DMB2 117 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 PYYP10082 97 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 GP9P14770 177 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 CD81P60033 236 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 SRSF2Q01130 221 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 FOXE3Q13461 319 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 LEMD1Q68G75 181 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 TOMM20LQ6UXN7 152 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 C18orf65Q6ZTR6 163 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 OR5AU1Q8NGC0 362 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 OR1L4Q8NGR5 311 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 FXYD5Q96DB9 178 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 USMG5Q96IX5 58 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 ATP6V0BQ99437 205 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 PFDN5Q99471 154 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 SHANK2-AS3Q9BTD1 123 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 C19orf24Q9BVV8 132 aa5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 SLC25A39Q9BZJ4 359 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 TECRQ9NZ01 308 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 YTHDF2Q9Y5A9 579 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 PUS1Q9Y606 427 aaKnown RBP eCLIP5.31□□□□□ -1.56
TOPBP1-203ENST00000503464 TMEM218A2RU14 115 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 NUPL2O15504 423 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 PAGE4O60829 102 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 HSPB1P04792 205 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 OR10J4P0C629 311 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 SFTA3P0C7M3 94 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 ZP3P21754 424 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 NPPCP23582 126 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 ARL3P36405 182 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 ATP5G3P48201 142 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 PSMB3P49720 205 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 UBE2G2P60604 165 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 C10orf91Q5T1B1 145 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 UNQ9165/PRO28630Q6UXU0 137 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 ZNF600Q6ZNG1 722 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 OR4X2Q8NGF9 303 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 RXFP4Q8TDU9 374 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 ZNF418Q8TF45 676 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 Q8WTZ3 238 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 C17orf77Q96MU5 243 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 OR5B12Q96R08 314 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 RNF2Q99496 336 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 PBDC1Q9BVG4 233 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 C16orf95Q9H693 158 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 TREM1Q9NP99 234 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 HIGD1AQ9Y241 93 aa5.3□□□□□ -1.56
TOPBP1-203ENST00000503464 FAM74A7A6NL05 159 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 GGTLC3B5MD39 225 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 H3BQ15 152 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 OR7C2O60412 319 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 CRLF1O75462 422 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 APOHP02749 345 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 FABP1P07148 127 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 ELANEP08246 267 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 SNRPCP09234 159 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 EDN2P20800 178 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 S100A1P23297 94 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 PPT1P50897 306 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 RPL15P61313 204 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 SLC35B1P78383 322 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 MEF2BQ02080 365 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 SCGB2A2Q13296 93 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 PEA15Q15121 130 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 KHDC3LQ587J8 217 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 FAM90A2PQ658T7 463 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 TEX38Q6PEX7 206 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 PQLC2Q6ZP29 291 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 IQCF2Q8IXL9 164 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 KLHDC1Q8N7A1 406 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 CYB561D1Q8N8Q1 229 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 LINC01006Q8NI28 216 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 PAXXQ9BUH6 204 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 EIF5A2Q9GZV4 153 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 GAR1Q9NY12 217 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 VAX2Q9UIW0 290 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 CARHSP1Q9Y2V2 147 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 U3KQE9 123 aa5.29□□□□□ -1.56
TOPBP1-203ENST00000503464 A0A0G2JLM5 398 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 ZNF98A6NK75 572 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 KRBOX1C9JBD0 128 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 H3BTX0 84 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 ZNF207O43670 478 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 NDUFB4O95168 129 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 NDUFA7O95182 113 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 IFNA1P01562 189 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms