RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 LINC01559Q495D7 138 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 PYY3Q5JQD4 70 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 OR13C6PQ8NH95 151 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 MLNRO43193 412 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 NHP2Q9NX24 153 aaKnown RBP13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 FANCMQ8IYD8 2048 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 A0A1B0GWJ7 208 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 TCRAP04437 139 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 MST1LQ2TV78 715 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 CYSLTR1Q9Y271 337 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 RNASE1P07998 156 aaKnown RBP13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 CD7P09564 240 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 SEC11AP67812 179 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 FAM90A2PQ658T7 463 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 ITLN2Q8WWU7 325 aaPredicted RBP13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 PROK2Q9HC23 129 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 PMS2P5A8MQ11 134 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 SLC25A39Q9BZJ4 359 aaPredicted RBP13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 PRSS22Q9GZN4 317 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 HEATR1Q9H583 2144 aaKnown RBP13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 Q6ZRM9 215 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 BEND2Q8NDZ0 799 aa13.23□□□□□ -0.29
HMGXB3-202ENST00000503427 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 DTX1Q86Y01 620 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 TYMSP04818 313 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 GNLYP22749 145 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 ANAPC10Q9UM13 185 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 FNDC10F2Z333 226 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 IGKCP01834 107 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 NBL1P41271 181 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 SPSB3Q6PJ21 355 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 TMEM256Q8N2U0 113 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 SMPXQ9UHP9 88 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 DIDO1Q9BTC0 2240 aaKnown RBP13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 OR5A1Q8NGJ0 315 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
HMGXB3-202ENST00000503427 IGHV1-3A0A0C4DH29 117 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 TMEM262E9PQX1 116 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 H0YJW9 148 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 OVOL1O14753 267 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 GZMBP10144 247 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 LINC01587Q99440 93 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 LINC01549A6NIU2 74 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 NPIPB5A8MRT5 1133 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 HSD52Q0P140 79 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 PEMTQ9UBM1 199 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 PPIFP30405 207 aaKnown RBP13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 SLC25A2Q9BXI2 301 aa13.21□□□□□ -0.29
HMGXB3-202ENST00000503427 ZNF585BQ52M93 769 aa13.21□□□□□ -0.3
HMGXB3-202ENST00000503427 SCRT1Q9BWW7 348 aa13.21□□□□□ -0.3
HMGXB3-202ENST00000503427 YAE1D1Q9NRH1 226 aa13.21□□□□□ -0.3
HMGXB3-202ENST00000503427 PHF3Q92576 2039 aaKnown RBP13.21□□□□□ -0.3
HMGXB3-202ENST00000503427 POLEQ07864 2286 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 C3orf36Q3SXR2 165 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 GAFA1Q96PS6 74 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 FNDC4Q9H6D8 234 aaPredicted RBP13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 PAX8Q06710 450 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 IGKV1D-17A0A075B6S4 117 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 EXOC3-AS1Q8N2X6 119 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 OR9G4Q8NGQ1 327 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 RSPO3Q9BXY4 272 aaPredicted RBP13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 JMJD8Q96S16 334 aa13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
HMGXB3-202ENST00000503427 M0R1W7 72 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 TSPAN13O95857 204 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 WNT2P09544 360 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 ERVK11-1P61568 191 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 CHTOPQ9Y3Y2 248 aaKnown RBP13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 TRAV40A0A0B4J280 105 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 EVI2AP22794 236 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 NUP35Q8NFH5 326 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 LRRK1Q38SD2 2015 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 TPTE2P1Q5T6R2 138 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 OR2K2Q8NGT1 345 aa13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 C1orf147Q96MC9 270 aaPredicted RBP13.19□□□□□ -0.3
HMGXB3-202ENST00000503427 ZNF407Q9C0G0 2248 aa13.18□□□□□ -0.3
HMGXB3-202ENST00000503427 SIGLEC15Q6ZMC9 328 aa13.18□□□□□ -0.3
HMGXB3-202ENST00000503427 LHFPL4Q7Z7J7 247 aa13.18□□□□□ -0.3
HMGXB3-202ENST00000503427 C9JQL5 133 aa13.18□□□□□ -0.3
HMGXB3-202ENST00000503427 ITGB1BP1O14713 200 aa13.18□□□□□ -0.3
HMGXB3-202ENST00000503427 CNTFRP26992 372 aa13.18□□□□□ -0.3
HMGXB3-202ENST00000503427 VDAC2P45880 294 aaPredicted RBP13.18□□□□□ -0.3
HMGXB3-202ENST00000503427 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 IGKV1-6A0A0C4DH72 117 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 ZNF124Q15973 351 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 D6R8Y8 96 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 HOXA3O43365 443 aaPredicted RBP13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 LDLRAD2Q5SZI1 272 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 LYPD1Q8N2G4 141 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 C3orf79P0CE67 100 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 VMO1Q7Z5L0 202 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms