RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 BUB3O43684 328 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 IFNA4P05014 189 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 ZNF90Q03938 601 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 GAMTQ14353 236 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 COMMD7Q86VX2 200 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 RPP25LQ8N5L8 163 aaKnown RBP11.8□□□□□ -0.52
SCLT1-204ENST00000503215 OR1S1Q8NH92 325 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
SCLT1-204ENST00000503215 HELTA6NFD8 242 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 FAM90A26D6RGX4 464 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 DEDDO75618 318 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 IAPPP10997 89 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 DEFB1P60022 68 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 TOMM5Q8N4H5 51 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 NAP1L6A6NFF2 107 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 VAMP1P23763 118 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 SRPXP78539 464 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 FCN2Q15485 313 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 CSNK1G2-AS1Q8NCQ2 148 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 CACFD1Q9UGQ2 172 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 X6R8D5 127 aa11.79□□□□□ -0.52
SCLT1-204ENST00000503215 FAUP35544 74 aaKnown RBP11.78□□□□□ -0.52
SCLT1-204ENST00000503215 PPP1R1AQ13522 171 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 OR2F1Q13607 317 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 SIGLEC15Q6ZMC9 328 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 EIF4E3Q8N5X7 224 aaKnown RBP11.78□□□□□ -0.52
SCLT1-204ENST00000503215 ASB13Q8WXK3 278 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 PBDC1Q9BVG4 233 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 MAGT1Q9H0U3 335 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 NRN1Q9NPD7 142 aa11.78□□□□□ -0.52
SCLT1-204ENST00000503215 IGKV1OR2-108A0A075B7D4 117 aa11.77□□□□□ -0.53
SCLT1-204ENST00000503215 ELOA3CA0A087WX78 387 aaPredicted RBP11.77□□□□□ -0.53
SCLT1-204ENST00000503215 ZFP92A6NM28 416 aa11.77□□□□□ -0.53
SCLT1-204ENST00000503215 TCRBP04435 133 aa11.77□□□□□ -0.53
SCLT1-204ENST00000503215 SPP1P10451 314 aa11.77□□□□□ -0.53
SCLT1-204ENST00000503215 GPX4P36969 197 aaPredicted RBP11.77□□□□□ -0.53
SCLT1-204ENST00000503215 MORN3Q6PF18 240 aaPredicted RBP11.77□□□□□ -0.53
SCLT1-204ENST00000503215 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
SCLT1-204ENST00000503215 H3BMM0 161 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 SFT2D2O95562 160 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 AP3S2P59780 193 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 LGALSLQ3ZCW2 172 aaPredicted RBP11.76□□□□□ -0.53
SCLT1-204ENST00000503215 GDF5OSQ5U4N7 250 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 LRTM2Q8N967 370 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 SLC35E1Q96K37 410 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 MFFQ9GZY8 342 aa11.76□□□□□ -0.53
SCLT1-204ENST00000503215 DUXBA0A1W2PPF3 345 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 HOXB5P09067 269 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 LYZP61626 148 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 PRR20EP86478 221 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 PRR20CP86479 221 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 PRR20DP86480 221 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 PRR20BP86481 221 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 PRR20AP86496 221 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 SLC25A21Q9BQT8 299 aaPredicted RBP11.75□□□□□ -0.53
SCLT1-204ENST00000503215 XCL2Q9UBD3 114 aa11.75□□□□□ -0.53
SCLT1-204ENST00000503215 TSC22D2O75157 780 aa11.74□□□□□ -0.53
SCLT1-204ENST00000503215 H2AFB2P0C5Z0 115 aa11.74□□□□□ -0.53
SCLT1-204ENST00000503215 HLA-DMBP28068 263 aa11.74□□□□□ -0.53
SCLT1-204ENST00000503215 BTCP35070 178 aa11.74□□□□□ -0.53
SCLT1-204ENST00000503215 ATP5IP56385 69 aaPredicted RBP11.74□□□□□ -0.53
SCLT1-204ENST00000503215 SNRPD3P62318 126 aaKnown RBP11.74□□□□□ -0.53
SCLT1-204ENST00000503215 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
SCLT1-204ENST00000503215 GGNBP1Q5YKI7 109 aa11.74□□□□□ -0.53
SCLT1-204ENST00000503215 LGALS9CQ6DKI2 356 aa11.74□□□□□ -0.53
SCLT1-204ENST00000503215 FRAS1Q86XX4 4008 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 PRSS46E5RG02 174 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 WRBO00258 174 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 IGKV3-20P01619 116 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 SLC25A6P12236 298 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 MIFP14174 115 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
SCLT1-204ENST00000503215 FXYD7P58549 80 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 RAP2BP61225 183 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 S100A12P80511 92 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 TMEM41BQ5BJD5 291 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 OR8G2PQ6IF36 304 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 TMEM182Q6ZP80 229 aaPredicted RBP11.73□□□□□ -0.53
SCLT1-204ENST00000503215 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 LINC00052Q96N35 136 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 PFDN2Q9UHV9 154 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 CELA1Q9UNI1 258 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 FLVCR2Q9UPI3 526 aa11.73□□□□□ -0.53
SCLT1-204ENST00000503215 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 IGLL5B9A064 214 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 SOCS3O14543 225 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 SYNGR2O43760 224 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 ADAP1O75689 374 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 GIPP09681 153 aaPredicted RBP11.72□□□□□ -0.53
SCLT1-204ENST00000503215 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
SCLT1-204ENST00000503215 Q6ZTC4 211 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 THAP8Q8NA92 274 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 OR11H4Q8NGC9 324 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 TRGV9Q99603 122 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms