RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 Q9H3A6 140 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 NBASA2RRP1 2371 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 HIST1H1EP10412 219 aaKnown RBP7.83□□□□□ -1.16
CLIP1-204ENST00000501271 PMCHP20382 165 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 AMTP48728 403 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 PLGLAQ15195 96 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 Q8N976 141 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 C5orf17Q8NAS9 161 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 TSKUQ8WUA8 353 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 GPR82Q96P67 336 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 MLST8Q9BVC4 326 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 HIGD1AQ9Y241 93 aa7.83□□□□□ -1.16
CLIP1-204ENST00000501271 CCL21O00585 134 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 TCRAP04437 139 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 LIPFP07098 398 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 RASL11AQ6T310 242 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 LY6G5BQ8NDX9 201 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 C18orf32Q8TCD1 76 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 SNHG12Q9BXW3 62 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 WNT10AQ9GZT5 417 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 NRN1Q9NPD7 142 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 ZNF324O75467 553 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-204ENST00000501271 TOMM40O96008 361 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 LTAP01374 205 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 KRTDAPP60985 99 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 MMDQ15546 238 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 FBLN7Q53RD9 439 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 PRR31Q5SQ13 230 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 SSBP4Q9BWG4 385 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-204ENST00000501271 SLC25A39Q9BZJ4 359 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-204ENST00000501271 ZNF586Q9NXT0 402 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 PAM16Q9Y3D7 125 aa7.82□□□□□ -1.16
CLIP1-204ENST00000501271 ATRXP46100 2492 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 IGKV1-17P01599 117 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 ARF6P62330 175 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 KLRD1Q13241 179 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 Q71RC1 249 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-204ENST00000501271 TCF24Q7RTU0 167 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 FAM19A2Q8N3H0 131 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 SMIM12Q96EX1 92 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 FMC1Q96HJ9 113 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 RNF5Q99942 180 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 RASL11BQ9BPW5 248 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 CHRDL1Q9BU40 450 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 HILPDAQ9Y5L2 63 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 TRAV8-1A0A0A6YYK1 113 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 A0A1B0GXF2 115 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 A6NNC1 897 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 K7EIM0 57 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 CNIH1O95406 144 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 CD24P25063 80 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 GPR6P46095 362 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-204ENST00000501271 CAMPP49913 170 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 ADORA2A-AS1P86434 159 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 NIT1Q86X76 327 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 CFHR4Q92496 578 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 C20orf144Q9BQM9 153 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 PRSS22Q9GZN4 317 aa7.81□□□□□ -1.16
CLIP1-204ENST00000501271 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
CLIP1-204ENST00000501271 ASH1LQ9NR48 2969 aaKnown RBP7.81□□□□□ -1.16
CLIP1-204ENST00000501271 C19orf71A6NCJ1 209 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 TOX4O94842 621 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 HTR1DP28221 377 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 EXOC3-AS1Q8N2X6 119 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 GTSF1Q8WW33 167 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 VAMP8Q9BV40 100 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 MRPL27Q9P0M9 148 aaKnown RBP7.8□□□□□ -1.16
CLIP1-204ENST00000501271 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 NBR2O15453 112 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 RAB4AP20338 218 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 Q86TA4 180 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 OR11H6Q8NGC7 330 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 OTORQ9NRC9 128 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
CLIP1-204ENST00000501271 A0A1W2PRD5 423 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 A0A1W2PRF3 423 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 A0A1W2PRM7 423 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 OR2J3O76001 311 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 IGLV2-11P01706 119 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 NTF3P20783 257 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 ZNF705AQ6ZN79 300 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-204ENST00000501271 ATP5L2Q7Z4Y8 100 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 SRSF8Q9BRL6 282 aaKnown RBP7.79□□□□□ -1.16
CLIP1-204ENST00000501271 ALKBH7Q9BT30 221 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-204ENST00000501271 RAB1BQ9H0U4 201 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 ZNF492Q9P255 531 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 DPM3Q9P2X0 92 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 P01737 135 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 C3orf79P0CE67 100 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 PRB4P10163 310 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-204ENST00000501271 NUTF2P61970 127 aaKnown RBP7.79□□□□□ -1.16
CLIP1-204ENST00000501271 KLF17Q5JT82 389 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-204ENST00000501271 CIARTQ8N365 385 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-204ENST00000501271 OR2D3Q8NGH3 330 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 C17orf77Q96MU5 243 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 RAXQ9Y2V3 346 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 MSRB2Q9Y3D2 182 aa7.79□□□□□ -1.16
CLIP1-204ENST00000501271 S4R3C0 116 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms